| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4382 |
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| Symbol | |
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| ID | 6113352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4836849 |
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| End bp | 4839017 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641624177 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001751231 |
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| Protein GI | 170723543 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.971787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.361781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATA CCGTCAACCT GAGCCAAGCC ACGCAGCAGC AAAACCCGGA GCAGGCTATC
GTCCATCGGC CGGACCTTGG CCCGTGGCTT GAAGTCATGC TGCAGGTCGC CCACCACTAC
CGGTTGGATG TATCCCCACA GCGCATTCGC CTGGCGGCCG TGGAAGATGC CCGGCCGCTG
GATGAAATCC TGCGCCACAT GGCGCGCCAG GCAGGCCTGT CGCTGCGCTT CGTGCGCTTC
GATGCCAAAG CCCTGCGGCA ATGGCGTACA CCACTGGTGC TGGAACTCGA CGATGGCCAG
TTGGCTGTGG TCGAAGCCGT GACCGAGGAC AACGAGCTGG CCGTGGTGTT CGCCGGCGAT
CAGAGCCTCA CCTCGCGCCT GCCCCGCGAA GCGCTCGAAG GGCGCATCAA CCGCGTGGCA
CTGATGCGCC CGGCTCGGCC GTTGCGCGAT GTGCGTACCG ACGACTACAC CGCCCCGTAC
GACCGCCACT GGTTCGCCCG CATCGTCCTG CGAGACCTGC GCCCGTATGG GCAGGTGATG
GTCGCCTCGC TGGTGGCCAA CGTGCTTGCC CTGGCCGGCG TGCTGTTCTC GATGCAGGTG
TATGACCGGG TGATCCCCGC CGAGTCCCTG CCCACCCTGT ACGTGCTGTT CGGCGGTGTG
GTGCTGGCGC TGGTGTTCGA CTTCAGCATG CGCCTGCTGC GCCTGAAGGT TACCGACCTG
CTCGGCAAGC GCGCCGACCT GCGCGTGTCA GATCTGGTCT ACGGCCATGC CCTGCGCCTG
CGCAACTCGG CGCGGCCGAA GTCCACCGGC TCGTTCATTT CGCAGTTGCG CGAGCTGGAG
TCGATCCGCG ACCTGATCAC CTCCAGCACC GCCACCGCGC TGGCAGACCT ACCGTTCTTC
CTGTTGTTCC TGTTCGTGTT CTGGCTGATC GGCGGCGTGC TGGTGTTTAT CCCCCTGGTG
GCACTGCTGG CCATGCTCCT GCCTGGCTTG CTGGCGCAGC GCCGGCTGGC ACGCCTGGCC
AATGCCTCGA TGCGCGAATC GTCACTGCGC AACGCCATGC TGGTGGAAAG CGTCCAGGGC
CTGGACGAAA TCAAGGCACT GCAGGCCGAA GCGCGCTTCG AGCGCCAATG GAACCAGTAC
AACGCAGCCT GCGCACACAC CAACCTGCGT CTACGCACCC TGACCAACGG CCTGGTGACC
TGGACCCAGA ACGTGCAAGG CGCGGTGTTT GCCGTGGTCA TCGTCATAGG CGCGCCAATG
GTGATTGCCG GCGACCTCAC CACCGGTAGC CTGGTAGCCG CCTCGATGCT TTCCTCGCGG
ATGATGGCGC CGCTGGCGCA GCTCACCCAT GTGCTGACCC GCTGGCAGCA AGCCAAGGTG
GCACTACAGG GCCTGGACAA ACTGATGCAG TCACCGGTCG ATCACCCCGA AGGAGAAGCC
CGTGTGCACC TGCCGGCCAT CCGCGGGGAG TACCGGCTGC GTCAGGCCAA TTTCCGCTAC
GACCCCGAGG CACCACCGGT GCTGAACATC GGCCAGCTGG ACATCCGGCC GGGCGAACGC
ATCGCAGTGC TGGGGCGCAA CGGCGCCGGT AAGTCGACCC TGCTGCAGGC GCTGGGCGGT
GCCATGGACC TGGTACAAGG CGAGGTCACG CTCGACGGCA TTGCCCTGGC CCACCTGGAC
CCGGCCGACC TGCGCCGTGA CGTCGGCTTG CTGGCGCAGT ATGCGCGGCT GTTCCACGGC
ACCCTGCGCG AAAACCTCAC CCTCGGTGCC GGCCAGGCCA GTGACCAGGA ACTGGTTGCC
GCGCTGGCCG CCACGGGCGC ACTGGACTTC GTGCGCCGGC TACCCAAAGG CATGGACCAC
CTGATTCTGG AAGGTGGCCT GGGCCTGTCC GGCGGGCAAC GCCAGGCACT GGTGCTGGCA
CGTTTGCTGG TGCGCCAGCC GCAGGTACTG CTGCTGGATG AACCCACCGC CTCGCTGGAC
GACACGACCG AACGCAAACT GCTCGATAAC CTCGACCGCT TCTGCCAAGG CCGCACCCTG
GTGATCGCCA CTCACCGTTT GAGCGTGCTG CAACGGGTCG AGCGGATCAT CGTGCTCGAC
GGCGGGCGCA TCGTCATCGA CGACAGCCGT GAAGCCGCCC TGGCCAAATT GCAAGGAGCG
CAGGCATGA
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| Protein sequence | MNDTVNLSQA TQQQNPEQAI VHRPDLGPWL EVMLQVAHHY RLDVSPQRIR LAAVEDARPL
DEILRHMARQ AGLSLRFVRF DAKALRQWRT PLVLELDDGQ LAVVEAVTED NELAVVFAGD
QSLTSRLPRE ALEGRINRVA LMRPARPLRD VRTDDYTAPY DRHWFARIVL RDLRPYGQVM
VASLVANVLA LAGVLFSMQV YDRVIPAESL PTLYVLFGGV VLALVFDFSM RLLRLKVTDL
LGKRADLRVS DLVYGHALRL RNSARPKSTG SFISQLRELE SIRDLITSST ATALADLPFF
LLFLFVFWLI GGVLVFIPLV ALLAMLLPGL LAQRRLARLA NASMRESSLR NAMLVESVQG
LDEIKALQAE ARFERQWNQY NAACAHTNLR LRTLTNGLVT WTQNVQGAVF AVVIVIGAPM
VIAGDLTTGS LVAASMLSSR MMAPLAQLTH VLTRWQQAKV ALQGLDKLMQ SPVDHPEGEA
RVHLPAIRGE YRLRQANFRY DPEAPPVLNI GQLDIRPGER IAVLGRNGAG KSTLLQALGG
AMDLVQGEVT LDGIALAHLD PADLRRDVGL LAQYARLFHG TLRENLTLGA GQASDQELVA
ALAATGALDF VRRLPKGMDH LILEGGLGLS GGQRQALVLA RLLVRQPQVL LLDEPTASLD
DTTERKLLDN LDRFCQGRTL VIATHRLSVL QRVERIIVLD GGRIVIDDSR EAALAKLQGA
QA
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