| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4379 |
|---|
| Symbol | |
|---|
| ID | 6113349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4821849 |
|---|
| End bp | 4823399 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641624174 |
|---|
| Product | anaerobic nitric oxide reductase transcription regulator |
|---|
| Protein accession | YP_001751228 |
|---|
| Protein GI | 170723540 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAA AGCCGCTGCT TACCGCCCTG CTTCCCTTGG TCAGCGACCT GTCCCGTGAC
CTGCCCGAAG AGGAACGCTA CCGCCGCCTG CTGCAAGCCA TGCGCGGCTT GCTGCCCTGC
GATGCCGCTG CATTGCTGCG GCTCGATGGC GAATGGCTGG TGCCACTGGC TGTCGACGGT
TTGTCTGCCG ATACCCTGGG CCGGCGTTTC AAAGTAAGCG AGCATCCGCG CTTCCAGGTT
TTGCTCAGCC GCGCCGAGCC CACCCGCTTT CCCAGCGACT CCCAGTTGCC CGACCCCTAT
GACGGCCTGG TCAATGCCCA CGACGTCGAC CTTCACGTGC ATGACTGCAT GGGCTGCCCG
CTGATGGTCG ACGAGCGCCC ATGGGGCCTG GTAACCCTCG ATGCCCTCAC CCCGGGCCAG
TTCCAGAGCC TGGAGCTCGA TGCCCTGCAA GCCTTCGCCA GCCTGGCAGC TGCCACCGTC
ACGGTGGCCG AACGCATAGA GCACCTGGCA CTGCGCGCCG AGGATGAGCA TCAGCGCGCC
GAAATCTATC GCCAGGCCAG CGGCCAGGAC AAAGAGCTGA TTGGCCAAAG CCCGGCGCAC
AAGCGCCTGC TGGATGAAAT ACGCCTGGTT GGCGGTAGCG ACCTGACCGT GCTGATCACC
GGCGAAACCG GCGTGGGCAA GGAACTGGTG GCCCAGGCCC TGCACCAGGC CAGCCACCGC
GCCAACAAGC CCCTGATCAG CCTCAACTGC GCCGCGCTGC CCGACACGCT GGTGGAAAGC
GAACTGTTCG GCCATGTGCG CGGGGCCTTT ACCGGCGCCC ACGGTGAGCG TCGCGGCAAG
TTCGAACTGG CCAACGGCGG CACGCTGTTT CTCGACGAAG TGGGCGAACT GCCGCTGGCG
GTGCAAGCAA AGCTGCTGCG GGTATTGCAA AGCGGGCAAC TGCAGCGCCT GGGCTCAGAC
CGCGAACACA CGGTAGATGT GCGCCTGATC GCAGCAACCA ACCGCGACCT TGCCGCCGAG
GTGCGCAACG GCAACTACCG CGCCGACTTC TACCACCGCC TGAGCGTGTA CCCGCTGCAG
GTTCCGCCGC TACGCGAGCG TGGGCGCGAT GTGCTGCTAT TGGCGGGCTA CTTCCTCGAA
CAGAATCGAT CACGTCTGGG CCTGAACAGC CTGCGCCTGA GCAACGAAGC GCAATCGGCG
CTTCTGGCTT ACGACTGGCC CGGCAACGTG CGCGAACTGG AACACCTGAT CGGTCGCTCA
GCCCTCAAGG CGCTGGGCCA GCACCCGGAC CGGCCACGCA TCCTTACCCT GCAAGCCAGT
GACCTGGACC TGCGTACCGT GGCGGGCGGG GTACAGGCAC CCTCCCCTGC GCCCCTGCCG
GCGCCGTCGC TGGCCGAAGG TGGCTTGCGC GAAGCTGTCG ACGGCTACCA ACGCCAGATC
ATCGATGCCT GCCTGCAGCG CCATCAGGAC AACTGGGCCG CCGCCGCCCG CGAACTGGGC
CTGGACCGCG CCAACTTAAA CCGCTTGGCT CGGCGCCTGG GCCTGCGCTA G
|
|---|
| Protein sequence | MTAKPLLTAL LPLVSDLSRD LPEEERYRRL LQAMRGLLPC DAAALLRLDG EWLVPLAVDG
LSADTLGRRF KVSEHPRFQV LLSRAEPTRF PSDSQLPDPY DGLVNAHDVD LHVHDCMGCP
LMVDERPWGL VTLDALTPGQ FQSLELDALQ AFASLAAATV TVAERIEHLA LRAEDEHQRA
EIYRQASGQD KELIGQSPAH KRLLDEIRLV GGSDLTVLIT GETGVGKELV AQALHQASHR
ANKPLISLNC AALPDTLVES ELFGHVRGAF TGAHGERRGK FELANGGTLF LDEVGELPLA
VQAKLLRVLQ SGQLQRLGSD REHTVDVRLI AATNRDLAAE VRNGNYRADF YHRLSVYPLQ
VPPLRERGRD VLLLAGYFLE QNRSRLGLNS LRLSNEAQSA LLAYDWPGNV RELEHLIGRS
ALKALGQHPD RPRILTLQAS DLDLRTVAGG VQAPSPAPLP APSLAEGGLR EAVDGYQRQI
IDACLQRHQD NWAAAARELG LDRANLNRLA RRLGLR
|
|---|
| |