| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4018 |
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| Symbol | |
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| ID | 6112987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4444897 |
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| End bp | 4445655 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623812 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001750867 |
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| Protein GI | 170723179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00119907 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCAGGT ACAATGTAAG ACTTTCCCTG CCTTGCGAAT TGCCCGCCAT GTCCGAACCC
GTCCGCCTGT CCAAACGCCT AATCGAGCAG CTCGGCTGCT CACGCCGAGA GGCAGAGCTG
TATATCGAAG GAGGCTGGGT CACGGTCGAT GGCGTTGTAG TCGAGCAGCC TCAGTTCAAG
GTCGAGCACC AGGCTGTCGA GCTGTTGCCG GGCGCCAATG CCGAGGCGCT TGACCCGGTT
ACCCTGCTGC TCAACCAGCC TGCGGGTGTC GATATCGATA CGGCCCGCGC CAGCATGAAC
ATGGCCAGCC TCAGCGAAGC ACATCGCGAA GGCGTGCGGG CTTTGCACGG GCACTTCACC
CGGCTGACCT GCTCGGCGCC CCTGGAGCGC GGTGCCAGTG GCCTGCAGGT GTTCACTCAG
GATTGGCGTG TTACCCGCAA GATCGAGGCC GACCTGCGTC GCCTGGAACA AGAATACATC
ATTGAAGTGC GCGGCGAGAC CACGCCACAG GCGCTGGAGC GCCTGGCGCG CGGTGCGACG
CGCAATGATC GGGAACTACC CAAGGCCAAG GCCAGCTGGC AGAACGAGAC CCATCTGCGC
CTGGCCCTGA AGAACCCACA ACCCGGTCAG ATCTCCGAGA TCTGCGCCTA CCTGCGCCTG
GAAATACTCA GCATGCGCCG TATTCGCCTG GGCGGTGTAT CCATGGGCAA GCTGCCTGTG
GGCAACTGGC GTTACCTGGC CGGCACTGAA CGTTTCTAA
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| Protein sequence | MGRYNVRLSL PCELPAMSEP VRLSKRLIEQ LGCSRREAEL YIEGGWVTVD GVVVEQPQFK
VEHQAVELLP GANAEALDPV TLLLNQPAGV DIDTARASMN MASLSEAHRE GVRALHGHFT
RLTCSAPLER GASGLQVFTQ DWRVTRKIEA DLRRLEQEYI IEVRGETTPQ ALERLARGAT
RNDRELPKAK ASWQNETHLR LALKNPQPGQ ISEICAYLRL EILSMRRIRL GGVSMGKLPV
GNWRYLAGTE RF
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