| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3966 |
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| Symbol | |
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| ID | 6112930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4389352 |
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| End bp | 4389765 |
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| Gene Length | 414 bp |
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| Protein Length | 137 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641623755 |
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| Product | carbon storage regulator, CsrA |
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| Protein accession | YP_001750815 |
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| Protein GI | 170723127 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
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| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0514023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATGC TCAGCCGCAA CATCGGCAAG ACCGTCGTCA TCGGCGGCAA CATCCGGGTC
ACCGTGGCCC AGGTCAACGG CTGCCAGGTC CGCCTCGGGA TCGACGCCCC GCGCGGTGTA
ATAATCGACC GTGAGGAGAT TCACCAGCGC CGCGTCGCCG AAGGTACTGT CCATGAGGCG
CCAGCATTCA GCATCGACGA TCACGTCAAG CTGGTGGCCG ATGCACGCCG GTACCGATGG
CTGCGGGATA GCGCCCTTCT GACGGACTCC GGCTTCACAC CAGCAGTATT CGATAGAGCG
GGCGGTATGG GCACAGTGCG CGCTGGTGAG GACCTGGACC AGCGAATTGA TGCCGCGATC
CGGCACTTCA CCGAGCAGCA CGTGGTGCAG GACACGCAGG GGCAGCAGCC ATGA
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| Protein sequence | MLMLSRNIGK TVVIGGNIRV TVAQVNGCQV RLGIDAPRGV IIDREEIHQR RVAEGTVHEA
PAFSIDDHVK LVADARRYRW LRDSALLTDS GFTPAVFDRA GGMGTVRAGE DLDQRIDAAI
RHFTEQHVVQ DTQGQQP
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