| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3933 |
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| Symbol | |
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| ID | 6112897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4366046 |
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| End bp | 4369360 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641623722 |
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| Product | lambda family phage tail tape measure protein |
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| Protein accession | YP_001750782 |
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| Protein GI | 170723094 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5281] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family
[TIGR02675] tape measure domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC AACAAGTCCA GGGGATGCTG GTCCAGATCG AGGCCACAAC GGCGCAGCTG
CGTCGGGAAC TGGCCAGCGC AGACCAGGTA GTCGCACGAA CTACCCAGTC GATCGATCAA
AACCTCGCTC AGGTCGACTC GGCGTTCGAC AGCGCAGGAG GGGCTGCCGA GAAAGCTGGT
GTGCTAATGC GTGGCGCCTT CGCTGCCGTG GCTGGTGCAG GATTGATCGG CGGCATCATC
AAGCAGGTCG ACGCTTACGG ACAGATGTCC GACCGCATGA GGGCCGCCGC CGGCAGCGCT
GGTGAGTACC AGACGGTGCA GGAGCACCTG CTGCGCACCG CGCAGGAAAC TTACCGGCCG
CTGGCTGAAG CGCAAGAGCT GTACATCCGT ACTGCGGACG TCATGCGTAG CCTGGGTTTC
AATACCCAGC AGACCCTCGA CATCACCGAC AGCTTCAGCT TCCTGCTGGT GACCAACGCG
GCTGCTGCCG ACAAGGCCGG TTCCGCTCTT GATGCCTATT CCAAGGCTCT GCAGACCGGC
AAAGTCGAGG CCGATGGCTG GGTGTCCATT CAGGACGCCA TGCCCACCAT CGTCACAGCG
ATCGCGACCG CCACCGGCAA GAGCGCCGAG GAAATCCGCA AACTGGGCGT AGAGGGCAAG
CTGTCGCTCG ATGACATCAA TACCGGCCTG CTACGCACCG TCGAGGTGAA CCGCAAGGCA
GCGACCGATA TGTCCACCAG CGTCCAGGAT GCGATGGTGA ACATCAGCAA CGCCGTCCAA
ACCTTCCTGG GTGGCATGGA AGAGCAGACC GGCGCTGTTG CTGGCCTGTC GAGTGTGCTG
ATCACTCTGG CCGACAACGT CGATCTGGTG GCCGTGGCCA TGGCTGGCGC TGGTGTTGCG
GCGTTGACCA ACTATGTTGC GAAGTCTGGG CTGGCTGCGA AATCGGCGCT GGCGGACCGC
GCGGCGCGTA TCGCCCAGGC CGAGGCCGTG CTGCAGGCTG CACTCGCCGA CCAGCGTAAG
GCCGAAACCG CGACCATCCT GGCGGCTCGC GAGGCAGCTG CTGCACGCGG CACGGCGGTA
CAGACGCAGA TGTCGATTCA ACTGGCTCAA GCCCGCCAGC GCGAAGCGGC GGCCACGGCC
GCAGTAGCAA CCGCACAGGC TGGTCTTCGC ACCGTGGGTG CCGGCCTGCT CGGCATCTTG
GGCGGACCGA TGGGGCTGGC GTTGCTGGCC GGCACTGCGG CGGCCAGCTT CTTGCTGCTG
CGGGACAACT CGGACTCACT TGAGAAGAAA CTCGGCGACC TGAGTGATCC GCTCGATAAA
CTGGTGGATC GGTTCAACAA GCTTAACAGC GCGACCCAAG CAGTAGCGCT CCGGGAGCTG
CAAGGCAAAA TCGAGGACAC GCAAAGCCAG TTGTCGCAAG TATCAGGATC GATTGCCGAT
CGGTTCGAAA ATGATCTTCG TGGCGTAGGT GCAGCTGGCG TCGACGGCCT AATGGCTGGC
TTGGCGCCCA TGCCAGCAGA GGCCCAACAA GCACTCGATT TGGTGCGAGC CGCCGCTAAC
GATTTTGCGA AGGGCGCGGT TGTGGACTGG AAGGCTGTCG CTGACCAGGT CCGCGTCATC
CCAGGCGTAA CCGAGGCGAT GGCCCAGGCC ATCGAAACCG GGCAGATCAA GGCCTCCGAT
CTAAGCGGTG AGCTGCAGAA CCTGAAGACC AAGCTCGCGG AGCTGACAGG CGAGACGGAC
CGAAATACGG TCTCGACCAC TGCCAACAAC GCCGCTAAGG CTGGCATGAG TTCTGCGGGG
CAGACCTACC TCGAGACCCT GCAAAAGCAG CTGGCCGGGC TGCAAGACAA TGGCGATGCA
ATGAAGATCG CCAACCGCCA TATCGCGGAG AACGCCGACC TCACCGAAAC AGATCGCCAG
GCAATCCTGT CGGCAGCCAG TGCAATTGAG GCGCAGAAGA AGGCCAACAA GGATGCAACC
GAAGGCAGTA AGGATCGCAC GAAGGCGCTG AATGACGAGA TCAAGGCACT CGACGCGATC
ATCGACCGCG CGCTACCGGA GAAGAAACGA CTCGAGGATC TGGCGGAGGG CGTGCAGGGG
CTACGCAAGG CCCAAGCTGC CGGCAAGATC ACCGCGGCCG AGATGGAGCT CGGCATCAAG
AACCTCAACA CGGCCTACGC CGACCCTGTC CTGCAGAAGC GGGCTGAGGA AGAGAGGAAG
CTTGCAGAAG TGCGCCGCAA CAGCGCCGAG GCCTATCGCA AGGCGATGGA AGTGGTGTTG
CAGACGCGGC AGGAGGCGAT CAGCGCGGAC GTGGCCGGCG TCGGCATGGG CGACGACCAG
CGCGAAGAGG CTGACCGGCT GAATGCGGTG CGGCAGAAGT ATGCCGAGGC ACGCCGTCAG
CTGGAGGAAC AGCAGGAAGA CGTGTCACGC CGCCTCAGCC AGGACGCCTA CCAGCAGCGG
CTGGCCGACT TGGCCGACTA CCAGGCGCGT GAGCTGCAGA TGGAGGTCGA CGGCTTCGAG
GCCAGGCTGC AGGCGCAACG TGACTACCGC AACGGCGCCA AGCGCGCATG GGCCAACATC
CAAGCTGATG CGGCGAACGT GGCCGGCGCA ACCGACGACA TGCTCACCAC CGGTTTCAAC
TCTGCTCGCG ATGCTGTGGC CGAGTTCGCC ATGACAGGGA AGGCCAACTT CAAGGATTTC
GCCACCAGTG TGATCTCGGA CATGGGCAGG ATTGCGAGCC AGCAGGCCGC GAGTTCGCTC
TTGAGTGGGC TGGTCGGCAT GGGCATTTCC GCTGCCAGTA GTTTCTTCGG CGGCGGTGGT
GGCAATGGCC TTCCGGCAGG ATCGGCAGGG GCAACTTCCT CGAATCTGGG CGCGTCCCAG
GCTGGCTACG GCAGCACCTA CTTTCCGCAA GCCTTGGGCG GCGCCTGGTC GAACGGCGTG
CAGCTGTTCG AAAAAGGTGC CGGGTTCGCT ACCAATACCA TTCTGAATAC GCCAACGATG
TTTGGCATGG GCGATGGTGA TCTTGGTATC GCTGGTGAGG CTGGGCCGGA GGCAATCATG
CCGCTGGCGC GCGGGGCGGA TGGCTCGCTC GGCGTGCAGA TGGTCGGCGG AACGGGTGGT
GGCTCGACCG TTGTTCAAGT CAGCGTGCCG GTGGCCGTGA CGTTGGAAGA TCGGAGCTCT
GATGGGATGG AGCTGGATAG CACAGCCCTG CAGCAGAACA TCCAGCAACA GATGCAAGGT
GTGGCTGAGC GGGCTATTGC CGCTTCTTGG CGCGCCGGCG GCATGAGCTA TCGAAACAGC
AACGGGAGAC GCTGA
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| Protein sequence | MADQQVQGML VQIEATTAQL RRELASADQV VARTTQSIDQ NLAQVDSAFD SAGGAAEKAG
VLMRGAFAAV AGAGLIGGII KQVDAYGQMS DRMRAAAGSA GEYQTVQEHL LRTAQETYRP
LAEAQELYIR TADVMRSLGF NTQQTLDITD SFSFLLVTNA AAADKAGSAL DAYSKALQTG
KVEADGWVSI QDAMPTIVTA IATATGKSAE EIRKLGVEGK LSLDDINTGL LRTVEVNRKA
ATDMSTSVQD AMVNISNAVQ TFLGGMEEQT GAVAGLSSVL ITLADNVDLV AVAMAGAGVA
ALTNYVAKSG LAAKSALADR AARIAQAEAV LQAALADQRK AETATILAAR EAAAARGTAV
QTQMSIQLAQ ARQREAAATA AVATAQAGLR TVGAGLLGIL GGPMGLALLA GTAAASFLLL
RDNSDSLEKK LGDLSDPLDK LVDRFNKLNS ATQAVALREL QGKIEDTQSQ LSQVSGSIAD
RFENDLRGVG AAGVDGLMAG LAPMPAEAQQ ALDLVRAAAN DFAKGAVVDW KAVADQVRVI
PGVTEAMAQA IETGQIKASD LSGELQNLKT KLAELTGETD RNTVSTTANN AAKAGMSSAG
QTYLETLQKQ LAGLQDNGDA MKIANRHIAE NADLTETDRQ AILSAASAIE AQKKANKDAT
EGSKDRTKAL NDEIKALDAI IDRALPEKKR LEDLAEGVQG LRKAQAAGKI TAAEMELGIK
NLNTAYADPV LQKRAEEERK LAEVRRNSAE AYRKAMEVVL QTRQEAISAD VAGVGMGDDQ
REEADRLNAV RQKYAEARRQ LEEQQEDVSR RLSQDAYQQR LADLADYQAR ELQMEVDGFE
ARLQAQRDYR NGAKRAWANI QADAANVAGA TDDMLTTGFN SARDAVAEFA MTGKANFKDF
ATSVISDMGR IASQQAASSL LSGLVGMGIS AASSFFGGGG GNGLPAGSAG ATSSNLGASQ
AGYGSTYFPQ ALGGAWSNGV QLFEKGAGFA TNTILNTPTM FGMGDGDLGI AGEAGPEAIM
PLARGADGSL GVQMVGGTGG GSTVVQVSVP VAVTLEDRSS DGMELDSTAL QQNIQQQMQG
VAERAIAASW RAGGMSYRNS NGRR
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