| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3894 |
|---|
| Symbol | |
|---|
| ID | 6112858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 4329115 |
|---|
| End bp | 4329516 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641623683 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001750743 |
|---|
| Protein GI | 170723055 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAG CGGGTTGCTA CGGCGTCAAC TCGGTGTTCT ACACCGGCAA GCGCTACGAG
CGCGCCCGCG ACTTCGTCAC TGACACCAAG CGGGTGCACT ACGATATTCC GCTGATCGGC
ATCGACGACC TGCAGCGCAT CATCCCGCTG GGTTGCACAC CTGTTGCAGT GGAACTGGTG
GAAGGTGCAC GGCCCCTGCC TGAATACACA CACCCTGATC GCGCCATCTA CATCTTCGGG
CCGGAAGACG GCAGCCTAGA TGCAAACGTG CGCGCGTGGT GTGAAGAAAC CATCTACATC
CCTACCGAAG GCTGCATGAA CCTCGCCGCG ACGGTGAATG TGGTGTTGTA CGACCGTTTG
GCCAAGGGGC TCAATACCCG CTCGGGGCCC AAGTTCAAGT AG
|
|---|
| Protein sequence | MRAAGCYGVN SVFYTGKRYE RARDFVTDTK RVHYDIPLIG IDDLQRIIPL GCTPVAVELV
EGARPLPEYT HPDRAIYIFG PEDGSLDANV RAWCEETIYI PTEGCMNLAA TVNVVLYDRL
AKGLNTRSGP KFK
|
|---|
| |