Gene PputW619_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3884 
Symbol 
ID6112848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4321807 
End bp4322502 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content48% 
IMG OID641623673 
ProductRHS protein 
Protein accessionYP_001750733 
Protein GI170723045 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGTTGA GCAATAGCGA GGGCGAGATA GTTTGGCAGG CGACCTATCG CTCATGGGGT 
GCAATCGAGG AGCTTAAGGT TCATGATATC GAGCAGAACC TAAGATTCCA GGGGCAATAC
TTTGAGAGTG AGACGGGGCT GCATTACAAC ACCTTAAGGT ACTACGACCC AGAAGTGGGG
CGTTTTGTTA CACAAGACCC CATAGGTCTA GGTGACGGAA TGAACTTTTA TCAGTATGCA
CCCAGCCCCG TTATGTGGGT CGATCCGTGG GGACTAGCTT TCAAAAGCGT CAATTTTGAA
GGGTCACCTG ATCTCTTCCC CACATCAGGA AACCAAAAGA ATATCGTTTC AATCCAACTG
CAAGGATCGA GAGGTAGAGA CTTTACTGAG GCTTTCAAAG AGGCTGGTTT AACAAGGGCG
CAGGTCAAGT CGATTGGTAA ATATACGTGG CACCATTTGG ATGACTTTGA TCCTGCAACA
GGCAAGGGAA CTATGCAGTT GATCGCAAAC TCAGCGCATG AAGCGTCCCT ACCGCACACA
GGGTCTGCAG CTCAATTTGA GAAGCACTTT GGCTTGTCTT CAGGCGCATA TGGAACACCC
GAAGCAGTGG CCATATCACA AGATCAGGGC TGGCTTAAAG TTCGCCACAA AAAAAGTATC
TTCAACTTGC TGAGCAGTAA AAATGAAAGA CTTTAA
 
Protein sequence
MELSNSEGEI VWQATYRSWG AIEELKVHDI EQNLRFQGQY FESETGLHYN TLRYYDPEVG 
RFVTQDPIGL GDGMNFYQYA PSPVMWVDPW GLAFKSVNFE GSPDLFPTSG NQKNIVSIQL
QGSRGRDFTE AFKEAGLTRA QVKSIGKYTW HHLDDFDPAT GKGTMQLIAN SAHEASLPHT
GSAAQFEKHF GLSSGAYGTP EAVAISQDQG WLKVRHKKSI FNLLSSKNER L