Gene PputW619_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3749 
Symbol 
ID6112708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4168217 
End bp4168873 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content56% 
IMG OID641623535 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001750600 
Protein GI170722912 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.450115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAG TTGTCATTTT CGGAGTGCTG GACACCGCCC AACTGGCGCA CTACTACCTG 
AAAAAAGACC CTGCAGTGGA CGTGGTCGGC TTTACCGTGC ACGAACGCTA CCTGCCAGAA
TCGAGAATGT TCGAAGGGCT GCCGGTGGTG CCTTTCGAAA CCCTGCAGGA CTATTTCCCA
AGCACCCACT ACAAGCTGTT TGCACCCATG ACCGGCCGCA AGATGAACCG CCTACGTGAG
TCGGTGTACA TTCAGGGCAA GGAAAAGGGC TACGACTTCA TTAGCTATGT CAGCCCCAAG
GCCACGGTGA ACGACAACGT CATCGGTGAA AACTGCTTCA TTCTCGAAGA CAACACACTG
CAACCTTTCA CCACCATCGG CAACAATGTG GTGATGTGGA GCGGCAACCA CATCGGCCAC
CATGGCGAGA TCCGCGACCA TGTGTTCTTT ACTTCCCATG TGGTCCTCTC CGGGCATTGC
CTGGTCGAGC CCTACGCCTG GTTCGGCGTC AACGCGACCA TCACCAACAA TTGCACCATC
GGCGCAGGTA CCTGCGTCGC CATGGGTGCA CTGATTTCAA AAGACACTCA ACCCTGGCAG
CTCTACATCG GCGCACCCGC GCGCGCGGTA AAGAGCAGTC AGGAACTGGA TTTTTAG
 
Protein sequence
MPKVVIFGVL DTAQLAHYYL KKDPAVDVVG FTVHERYLPE SRMFEGLPVV PFETLQDYFP 
STHYKLFAPM TGRKMNRLRE SVYIQGKEKG YDFISYVSPK ATVNDNVIGE NCFILEDNTL
QPFTTIGNNV VMWSGNHIGH HGEIRDHVFF TSHVVLSGHC LVEPYAWFGV NATITNNCTI
GAGTCVAMGA LISKDTQPWQ LYIGAPARAV KSSQELDF