| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3535 |
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| Symbol | |
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| ID | 6112493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3896294 |
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| End bp | 3897697 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641623322 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001750387 |
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| Protein GI | 170722699 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.908198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGC CAAGCCGCAT CAGCCTGTTG ACCCTGTGCC TGGGCCTCAC CGCCTGCAAT
ACACCCCCTG CGCCCTCAAG CGGCATCACC GCACCGCAAC ACTGGCAAGG CGAGGCAGCT
GCGCCCGCCA TCGAGCTGCC ATCGGTGCTG TGGTGGCAGG CGTTCGCCAG CAGCGAGCTG
GACCAACTGG TCAAGCGCGC GCAACACAAC GCCCATGACC TCGCCGCTGC CGCGGCCCGC
GTACGTCAGG CCCAGGCACG CGCCGTGATC GCTGGCGCGC CGTTGCTGCC AGAGGTGCAA
GGGGGCCTCG ATGGCAGCCG CCAACGCCTG CTGCACGGCG AAGGGTCTGA CCAGCTGGAC
GTCAATAGCA GCGAACCCAC CTACACAGCC TTCGGCCTGC AACTTACCGC CAGCTACGAA
CTCGACTTCT GGGGCGGCCT GCGCGCGGCT CGGGCGAGCG CGCTGCACGG CCTCGACGCC
AGCCGGTTCG ACCGCCAGAC AGTGGAGCTG ACCCTGGTCA GTGCGGTTGC CGACAGCTAC
CTGCAAGGCA TCGCCCTGGA AGAACAGCTG CGCATCGCAC GCCTTAACCT GCGCAATGCA
CGTGAGGTGC TCAACCTGGT CGAAACCCGC CAGCGTGCAG GGTCCGCCAC CCGCCTTGAA
CTGGCCCAGC AGCGCAGCCT GGTGGCGGCT CAGGAGCGCC AGGTGCCGCT GCTCGAGCAA
AAGCGGCAAG ACAGCCGCAT CACCCTTGCC ACCTTGCTCG GTGACCCGGT GCAGGCCTTG
CCGGTCAGCC GCCAGCCGAT CACCACCCTG CAGTGGCCGG CAATCGGCAG CGGCGTCCCC
AGCGAGCTGC TGACTCGCCG CCCGGACATC GCCGCTGCCG AAGCGCGCCT GGCCGCCGCC
AACGCCAATG TGCAGGTGGC CAGGGCGGCC ATGCTGCCGA AGCTGACGCT TGGCGCCAAC
CTTGGCACGG GCGCGAACAC CTTTGCCGAG GTGCTCGACA GTTCCTACTA CACACTCACC
GCCGGCCTGG TCGCGCCCAT CTTCAACAAC GGTCGGCTGC GCGCCTCACG CGAGCTGGCC
GAAGCCGAGC AGGACGAACT GCTGGAAAAC TATCGAGGCA GCATCCTCGC CGGCTTTGCC
GATGTTGAAA AAGCCCTTAA CGCCATTGAG GGTGTGGAGC GTCAACGGCT GTGGCAGGAC
GAGGAAGTGT TGCAGGCACG CCACGCCTTC GACCTGGCAC AACAGCGCTA TGGTGCTGGC
GCCGAGACCC TGCTGACCGT GCTGGAGACC CAGCGCACGC TTTACCTGGC CCAGGACCAG
CAAGCGCAGT TGCGCCTGGC CCGCCTGCAG GGCAGCGTGG CGCTGTACAA GGCGCTTGGG
GGCGGCTGGC AGGTACCGCA CTGA
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| Protein sequence | MTLPSRISLL TLCLGLTACN TPPAPSSGIT APQHWQGEAA APAIELPSVL WWQAFASSEL
DQLVKRAQHN AHDLAAAAAR VRQAQARAVI AGAPLLPEVQ GGLDGSRQRL LHGEGSDQLD
VNSSEPTYTA FGLQLTASYE LDFWGGLRAA RASALHGLDA SRFDRQTVEL TLVSAVADSY
LQGIALEEQL RIARLNLRNA REVLNLVETR QRAGSATRLE LAQQRSLVAA QERQVPLLEQ
KRQDSRITLA TLLGDPVQAL PVSRQPITTL QWPAIGSGVP SELLTRRPDI AAAEARLAAA
NANVQVARAA MLPKLTLGAN LGTGANTFAE VLDSSYYTLT AGLVAPIFNN GRLRASRELA
EAEQDELLEN YRGSILAGFA DVEKALNAIE GVERQRLWQD EEVLQARHAF DLAQQRYGAG
AETLLTVLET QRTLYLAQDQ QAQLRLARLQ GSVALYKALG GGWQVPH
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