| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3495 |
|---|
| Symbol | |
|---|
| ID | 6112453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3853630 |
|---|
| End bp | 3854520 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641623282 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750347 |
|---|
| Protein GI | 170722659 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCC TGCTGCGCCT GCTGGTGTTC TGCCTATGGC CATTGGGTTC GCTGTCCGCC
AGCGAAATCC TGTTGGTCGG TGGCGAGGAA CAGCCCGGCA TCCGTAGCTT TGTCGCGGCC
CTCGAAAGCC GCCGCAACCA AGACCAGGTA CGGTTTCAGA CCGTTGCCGA ACTGCCGCGC
CCAGGCAAGC TCAAGGCCGA CCTGCGCCTG GTGCTGCTTG ACAGCGCCGC ACTGGAGTGG
CGCCTGGCCG AAAGCAAAGG GCCGGCGGCC CTGGCCATGC GCATCAGCCG CGTGCAGGCC
GAGCAGCGCC TGGGAAAGTC GCGACCGGCG TACCTGACGC TGCTGTGGAG TGACCCGCCC
CTGGCTCGCC AGTTGCGCCT GGCCCGCTAC CTGTTGCCGC AGGCCCAACG CATCGGCGTG
CTGTACGCAG AACACAGCCA TTTTCTGCTT GACGAACTAC GCCAGGCGGC CCGGCCACTG
GGGCTGGAAA TTGTCGCCCA GCAATGGCCG GACCAGCGCG ACAGCCGGCC GCTGCTGGAT
CTGTTGGGCA ATAGCGACGT GCTACTGGGC CTGGAAGACC CCGACCTTTA CAACTCCAAG
ACCGCCAAGA ACCTGCTGCT AAGCAGCTAC GGCCGGCAGA TGGCGTTGAT CGGCCCGAAC
GCCGGTTTCG TCCGCGCCGG TGCTCTGGCC AGTACCTACA GCGACCAAGA GGACTGGCTG
GCGGTGCTCG ACCAACTGCT CGACCGCCCG CCAGCGCAAT GGCCGCGCAG CCTGTACCCC
GCACGTTTCG GGGTCAGCGG CAACCAGCAG GTGGCTCGCG CCCTGGGCCT TGAACCGATT
GATCCGAACG CCACTGCCAA GGTTTTGGCT GAAGGAGAAC CCACCCCATG A
|
|---|
| Protein sequence | MARLLRLLVF CLWPLGSLSA SEILLVGGEE QPGIRSFVAA LESRRNQDQV RFQTVAELPR
PGKLKADLRL VLLDSAALEW RLAESKGPAA LAMRISRVQA EQRLGKSRPA YLTLLWSDPP
LARQLRLARY LLPQAQRIGV LYAEHSHFLL DELRQAARPL GLEIVAQQWP DQRDSRPLLD
LLGNSDVLLG LEDPDLYNSK TAKNLLLSSY GRQMALIGPN AGFVRAGALA STYSDQEDWL
AVLDQLLDRP PAQWPRSLYP ARFGVSGNQQ VARALGLEPI DPNATAKVLA EGEPTP
|
|---|
| |