| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3459 |
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| Symbol | |
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| ID | 6112417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3808769 |
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| End bp | 3809779 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623246 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001750311 |
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| Protein GI | 170722623 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.195796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.579025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA AAGACACCAT CTCCATGCAA CTGGTGCGCG AAGCCCTGTT GCAGACCTGC
CCGGCGGGTG AGCCGGATGC CGCTCTGCTG GCGCAGGCTG GCATCGACAT CGGCCAGCTC
GACCAGGCTG ATGCACGCGT CAGCGCCGAG GCTTACTCCC GGCTTTGGCG CTTGCTGGCG
CAACGCTGCA ACGATGAATT CTTCGCCATG GACCCCCGTG GGCTGCGTAC TGGAAGCCTG
GCATTCCTGT GTCGGGCGAG CATGGCCCAG CCCACCCTGC AGGCTGGCCT GGAAACGGCG
TTGGCATTTC TTTCGCTGAT GCTGCAGGAC CTGCAACCGG TACTGGTGCG CCAGAAAAGC
CTGGCCGAAA TCGTCATCGT TGAACCCAAT GATCAGCCTC GGCGTGCGTT CACCTATTTT
ACCTTCTGGA TGATCGTGCA CGGCGTCGCC TGTTGGTTGG GAGGGCGGCG TATTCCGATC
CTGGCGATTG ACTTGCGGTG CGCCGAGCCA CCTTTCTGTG ATGACTACCG GGTGATGTTC
TCGGAAAACC TGCAGTTCGA ACGCCCCTTG ACCCGGATGA TCATCGCCGG GGACTGCCTT
GACCTGCCGA TGCGCCGCAG TGAGGACGAG CTTCAGCGCT TTCTGGCAGA GGCACCTGGC
AACATCCTGG TGAAGTATCG CGACCCGAAC AGCCTGGCCC GTCGTATCCG CCAGACGCTT
AGCCAGCAGG CGCCCAGCCA ATGGCCTGCC GCCGAGCAAC TGGCGGCAAC ATTGTGCATG
TCGGCGTCAA CCTTGCGGCG CCGTTTGGGC GAAGAGGGCC AGAGCTACCA GGCGCTTAAA
GACAGTATTC GCCGCGAGTT GGCAATTGCC TGGCTGGCGC AGCCGCAGCT TGGGCTTGGC
GACATCGCCG AGCGGTTGGG CTTTGCCGAC AGCAGTTCGT TCTACAAGGC GTTTCGCAAG
TGGTTCGGGT GCAATCCGGG GCATTACCGC AGTGTCTTCC TGCAGGCGTA A
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| Protein sequence | MSEKDTISMQ LVREALLQTC PAGEPDAALL AQAGIDIGQL DQADARVSAE AYSRLWRLLA
QRCNDEFFAM DPRGLRTGSL AFLCRASMAQ PTLQAGLETA LAFLSLMLQD LQPVLVRQKS
LAEIVIVEPN DQPRRAFTYF TFWMIVHGVA CWLGGRRIPI LAIDLRCAEP PFCDDYRVMF
SENLQFERPL TRMIIAGDCL DLPMRRSEDE LQRFLAEAPG NILVKYRDPN SLARRIRQTL
SQQAPSQWPA AEQLAATLCM SASTLRRRLG EEGQSYQALK DSIRRELAIA WLAQPQLGLG
DIAERLGFAD SSSFYKAFRK WFGCNPGHYR SVFLQA
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