| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3370 |
|---|
| Symbol | |
|---|
| ID | 6112321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 3711898 |
|---|
| End bp | 3713127 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641623151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750223 |
|---|
| Protein GI | 170722535 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.660681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAA AACTGTATGA ATGGCTCTCT GGAGCTGTTT TAGATGATCA TTCACGCCGA
AAACACAAAA TACTTAGAGA GTATTTCTTT CAGTATTTAA CCGTGAGATG CCAACTTCCT
CAGCAGTCAC GATTTAAACT AGCGGTAATT GATGGGTTCT CTGGTGGCGG TCGGTACCAG
TGCGGAGCAG CTGGGTCGCC AGTCATTTTC ATTGAAGAGT TGAAGAGAGC TCTGCGCCAT
ATAAATATCA ACCGTGGATC ACAGGGGCTT GGACTGGTAA CTATTGAGTG TTTTTTGATA
CTCAATGATG CAGACAAAAA TGTCACTGCA TTCCTACAGG AAAATCTAGC ACCTATAATC
GCCGAGGCCA AAGATACAGA ATCTAGACTT ATCCTAAATA CCGTATTTTT CAGCGAGCCA
TTCGAACAGC TTTATCCAAA AGTCAAAGAA CTCCTATCAA AATATCGCTG CCGAAACGTT
CTTTTCAATT TAGATCAGTG CGGCCATAGC CATGTCGATA GAAAAACGAT CCTCGACATA
ACTCGATCAA ACCCATCGGC CGAAATTTTC TATACCTTTG CGATCGAAGC GCTGGTTTCA
TATCTAAAAA AATCAGACCC CACAATGCTA ATAAGCCAGC TAGCCCCAAT TGGTTTAAGG
GAAGACGACA TTAGAAATCT CGAAAACCAT CTAACCAAAA AAAGTTGGCT TGGTGCGGCG
GAGCGACTAG TATTCCAGGC ATTCAAAGAG TGTGCTCCTT ATGTAAGCCC CTTCTCCATC
AATAATCCGT CAGGCTGGAG ATACTGGCTA ATTCACTTCG CCAACTCTTA CAAAGCCCGC
CAAGTCTACA ATAACATTCT GCACGACAAT AGTAGCTCTC AAGCCCACTT TGGTAGATCG
GGCCTGAACA TGCTCTCTTA TGACCCAGCG GAAGATGGCT CACTTTACTT ATTCGGCGAG
TCAGATCGAG AAAATGCTCG AAATGAACTC CAAGAAGATA TCCCTCGGAT CATATCTGAA
TCGGGTGATG CCGTGTCTGT TAGCGATTTC TATGCAAGTA TCTACAACGA GACGCCTGCT
CATACCGACG ATGTACATGC TGCTATCATC CAAAGCCCCG AAATTGAGGT TATCACTCCT
GGGGGCGGCA CCCGAAGAAA GCCGAATACA ATCACGGTAA ATGACACTTT GAAATTCAAG
AGCCAAAGAA CATTCTTCCA CATGCTGTAA
|
|---|
| Protein sequence | MAGKLYEWLS GAVLDDHSRR KHKILREYFF QYLTVRCQLP QQSRFKLAVI DGFSGGGRYQ
CGAAGSPVIF IEELKRALRH ININRGSQGL GLVTIECFLI LNDADKNVTA FLQENLAPII
AEAKDTESRL ILNTVFFSEP FEQLYPKVKE LLSKYRCRNV LFNLDQCGHS HVDRKTILDI
TRSNPSAEIF YTFAIEALVS YLKKSDPTML ISQLAPIGLR EDDIRNLENH LTKKSWLGAA
ERLVFQAFKE CAPYVSPFSI NNPSGWRYWL IHFANSYKAR QVYNNILHDN SSSQAHFGRS
GLNMLSYDPA EDGSLYLFGE SDRENARNEL QEDIPRIISE SGDAVSVSDF YASIYNETPA
HTDDVHAAII QSPEIEVITP GGGTRRKPNT ITVNDTLKFK SQRTFFHML
|
|---|
| |