Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3320 |
Symbol | |
ID | 6112271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 3661023 |
End bp | 3662033 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641623102 |
Product | proline racemase |
Protein accession | YP_001750174 |
Protein GI | 170722486 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3938] Proline racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACATCA TTGAACTGGC GGGCGTACAC GCCGAAGGTG AAATTGGCCG GGTGCTGATC AAGGGTGCAC CCGCCATCCC CGGACACAAT CTTCGCGAAA AGATGGATTA CCTCAATCAC GTGGATGACA GCCTGATCCG GCGCTGCCTC TTCGAACCTC GCGGTTCGGC CAACATGACC GTGAACCTGC TGCTTGCACC GGTGGATGCT TCGGCGGACA TCGCGTTCAT CCCCTTGCAG CCCGACGGCG CCCACGCACT GTCTGGTTCC AACTGCATCT GCGTGGCCAC CGCCGCCCTG GAAATGGGCA CGATCGTCAT GCACGAACCG CTTACCACGG TGGTGATCGA GACCCCGGCC GGGCGGGTGG AGGCGCGGGC CGAGTGCCGC GCCGGCAAGT GTGAACGGGT AACGGTGAAG ATGGCGCCCA GCTTCGTCGA GCACCTGGAC CACCCACTGG AGGTGCCCGG CCTTGGGCAA CTGAACGTGG ATGTGGCCTA TGGCGGCTGC TTCTTTGTGC TGGTCGAGGC CGAGCAACTA GGCGTGCGCC TGGTGAAGCA GGCGGCGCGA CGGCTGGTTG AACTAGCCGC CGTCATCAAG CAAGCCGCCC GGGAGCAGAT TCACCTCGCG CAGCGCCCGG AAATGGGCAC CTGCAAGATC GAATACGTGA TGTTCACCGA CAACGAGGAC GGCAAACGGC TGAACTGCAA CATCATCCAT CCCGGCCGCG TCGACCGCTC ACCTTGCGGC ACCGGCAGCG GTGCACGGCT GGCGACCCTG CACCGACGTG GCCTGGTGGC ACTGAACCAG CCCGTGACCT TCCACAGCCT GATCGGCAGC ACGTTCGAGT GCCGGATCGT CGAGGAGGCC GAACCCCTCA GCGGCAACAT CACCCATGAA ATCAGCGGCA GGGCCTGGCT CTACTCCCAC GAGAAATACT GGGCAGATAC CACAGACCCC TACGCCAGCG GCTACGTGCT CTCAGACACC TGGGGGCCGG ATGCCGACTA G
|
Protein sequence | MDIIELAGVH AEGEIGRVLI KGAPAIPGHN LREKMDYLNH VDDSLIRRCL FEPRGSANMT VNLLLAPVDA SADIAFIPLQ PDGAHALSGS NCICVATAAL EMGTIVMHEP LTTVVIETPA GRVEARAECR AGKCERVTVK MAPSFVEHLD HPLEVPGLGQ LNVDVAYGGC FFVLVEAEQL GVRLVKQAAR RLVELAAVIK QAAREQIHLA QRPEMGTCKI EYVMFTDNED GKRLNCNIIH PGRVDRSPCG TGSGARLATL HRRGLVALNQ PVTFHSLIGS TFECRIVEEA EPLSGNITHE ISGRAWLYSH EKYWADTTDP YASGYVLSDT WGPDAD
|
| |