Gene PputW619_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3320 
Symbol 
ID6112271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3661023 
End bp3662033 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content64% 
IMG OID641623102 
Productproline racemase 
Protein accessionYP_001750174 
Protein GI170722486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3938] Proline racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA TTGAACTGGC GGGCGTACAC GCCGAAGGTG AAATTGGCCG GGTGCTGATC 
AAGGGTGCAC CCGCCATCCC CGGACACAAT CTTCGCGAAA AGATGGATTA CCTCAATCAC
GTGGATGACA GCCTGATCCG GCGCTGCCTC TTCGAACCTC GCGGTTCGGC CAACATGACC
GTGAACCTGC TGCTTGCACC GGTGGATGCT TCGGCGGACA TCGCGTTCAT CCCCTTGCAG
CCCGACGGCG CCCACGCACT GTCTGGTTCC AACTGCATCT GCGTGGCCAC CGCCGCCCTG
GAAATGGGCA CGATCGTCAT GCACGAACCG CTTACCACGG TGGTGATCGA GACCCCGGCC
GGGCGGGTGG AGGCGCGGGC CGAGTGCCGC GCCGGCAAGT GTGAACGGGT AACGGTGAAG
ATGGCGCCCA GCTTCGTCGA GCACCTGGAC CACCCACTGG AGGTGCCCGG CCTTGGGCAA
CTGAACGTGG ATGTGGCCTA TGGCGGCTGC TTCTTTGTGC TGGTCGAGGC CGAGCAACTA
GGCGTGCGCC TGGTGAAGCA GGCGGCGCGA CGGCTGGTTG AACTAGCCGC CGTCATCAAG
CAAGCCGCCC GGGAGCAGAT TCACCTCGCG CAGCGCCCGG AAATGGGCAC CTGCAAGATC
GAATACGTGA TGTTCACCGA CAACGAGGAC GGCAAACGGC TGAACTGCAA CATCATCCAT
CCCGGCCGCG TCGACCGCTC ACCTTGCGGC ACCGGCAGCG GTGCACGGCT GGCGACCCTG
CACCGACGTG GCCTGGTGGC ACTGAACCAG CCCGTGACCT TCCACAGCCT GATCGGCAGC
ACGTTCGAGT GCCGGATCGT CGAGGAGGCC GAACCCCTCA GCGGCAACAT CACCCATGAA
ATCAGCGGCA GGGCCTGGCT CTACTCCCAC GAGAAATACT GGGCAGATAC CACAGACCCC
TACGCCAGCG GCTACGTGCT CTCAGACACC TGGGGGCCGG ATGCCGACTA G
 
Protein sequence
MDIIELAGVH AEGEIGRVLI KGAPAIPGHN LREKMDYLNH VDDSLIRRCL FEPRGSANMT 
VNLLLAPVDA SADIAFIPLQ PDGAHALSGS NCICVATAAL EMGTIVMHEP LTTVVIETPA
GRVEARAECR AGKCERVTVK MAPSFVEHLD HPLEVPGLGQ LNVDVAYGGC FFVLVEAEQL
GVRLVKQAAR RLVELAAVIK QAAREQIHLA QRPEMGTCKI EYVMFTDNED GKRLNCNIIH
PGRVDRSPCG TGSGARLATL HRRGLVALNQ PVTFHSLIGS TFECRIVEEA EPLSGNITHE
ISGRAWLYSH EKYWADTTDP YASGYVLSDT WGPDAD