Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3278 |
Symbol | |
ID | 6112229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3619154 |
End bp | 3620371 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641623060 |
Product | PucR family transcriptional regulator |
Protein accession | YP_001750132 |
Protein GI | 170722444 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG2508] Regulator of polyketide synthase expression |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.698814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCTTGA CCCTTAATGA AGTCCTGCAC CTGCCCGGCT TGGAGGGCAT GAGGGTCCGC GCAGGCGAGC GTTACTTGCA ACGACGAGTA TGCTGGTCAT ACGTGGCGGG AAATGAGGGT ATTACCGCGT GTAAAATGGG CGGCGAACTG GTATTTATCT CGGAAATCAA TTACCTATGT GACGAACCCA AGCTGCTCAC TTTGGTCGAG GTTGGTGCTG TGTTGGGCAT TGCCGGGGTA GTGGTTCTTA CTGGCGGCTC GTTTCCCCAG TGCATTTCGT CCTCGGTAAT CGCTCGTGCT GAACAGTTGG GCTTACCGCT GATCGAGCAA CCCTCATCGC TGAGGTTGGT ATTTGTGACC CACCTGATCG ATAGGGCCCT GATGCATATG ACTCAAGTAC GACGCTCGCG CAACCACATT CTCGGCCAGT TGCTGACCGG AGATTACTCG AGCTTGGCCA TTGCACGACA GCGGGCTGCG CATTTGCAAC TGACGCTTGA TATCCCACGG CGACTGGTAG CGCTGCGTTT GTTTGGTATC GAGACGCTGT TTGAGCGCCA AGGCCTGGCT CAGGGCGAGC AGTTGTGGCA AGCCACTCGG CAGGTCTTGG AAGACCAACT TGAAGCCTGG AGCCGCAGCC GCCCAGGAAC GGTGACGGTA GATATGCAGG GCGACCTCTT CGTGCTGCTG CTAGTGGATG CCGATGACCT GCCGGCAGCC TTGACCACGT TGCGTCGGCA ACTGATCGGA GTGGCAGGGG AGTTGGAGGT GTACATGGGT CTGTCGAGCC TGGCTGAAGA CTGCGGACAT TACTGCCGAC TGCTCAACGA AGCGCGTCAG GCGCTGAATG TGGCGCAGAA CCTGCGCCCG GAGAGCGGTT ACTGCGATTT CAACAAGTTG GGCGTGTTGG GTTTGCTGCA GGGGATAGTC GACCACACGC TAATCGATGA CTTCGTCGAA ATGACACTCG GCCCGCTGTT CGTGCCCGGT CGTAAACACC CTAATGTACT TGTACATACC CTCGAGGCTT TGCTCAAGGA AAACGGCAAC GGGATCAAGG CTGCCCAGCG CCTGGGACTT CACCGCAACA CTATTAATCA ACGTATCCAG CGCATCGAAC AAAGGAGTGG GAAATCCTTG GATGATCCAC TTTTTCGTAT GAATGCTTCG ATCGCTATTA TGGTATGGCA CATGTCTGTA GCCCGAGGTA AGGAATAA
|
Protein sequence | MSLTLNEVLH LPGLEGMRVR AGERYLQRRV CWSYVAGNEG ITACKMGGEL VFISEINYLC DEPKLLTLVE VGAVLGIAGV VVLTGGSFPQ CISSSVIARA EQLGLPLIEQ PSSLRLVFVT HLIDRALMHM TQVRRSRNHI LGQLLTGDYS SLAIARQRAA HLQLTLDIPR RLVALRLFGI ETLFERQGLA QGEQLWQATR QVLEDQLEAW SRSRPGTVTV DMQGDLFVLL LVDADDLPAA LTTLRRQLIG VAGELEVYMG LSSLAEDCGH YCRLLNEARQ ALNVAQNLRP ESGYCDFNKL GVLGLLQGIV DHTLIDDFVE MTLGPLFVPG RKHPNVLVHT LEALLKENGN GIKAAQRLGL HRNTINQRIQ RIEQRSGKSL DDPLFRMNAS IAIMVWHMSV ARGKE
|
| |