| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3258 |
|---|
| Symbol | |
|---|
| ID | 6112210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3599500 |
|---|
| End bp | 3600168 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641623043 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001750115 |
|---|
| Protein GI | 170722427 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGC ACAGCGCAGC CAAGGTGGAC ATCGACGCGT TGCTGCAGGA CACCTATCTG
TTGGTTGTCG AGTTGCGACA CGGTACCGAT GCGCACAGTA GTCCGCAGCT GTGGTCAAGG
TGCGTGGCTG ATGTCGAGCA TGTACGAGCC ATGCTTCAGC AGGAGGGTCT GGACCGCCGC
AGCGTCGATC TGATCAGTCA TGCGCAGTGT GCGCTTCTGG ACGAAACAGT ACTTGCCCGC
GCCGAAGGCA GTGCCCATGA GGATTGGGCG ATGGAGACCT TACAGGCAAG GTTTTTCAGC
AGCCATCAGG CGGGGGAGTC GCTCTACGAA GATATGCGCT CTGCGCTGCA GGAAGCCTCT
GTGCACCCTT GCGTACTCAT AGTATTTCAT CGAGTCCTGA TGCTTGGATT CCTGGGGCGC
TACCGAGAAG CAAACCACCC GGAGCGGCAG CAGTTGTTGA CTGCCATCTC CGCGCAAGTG
CCGCCTCTGG ATACAAGTCA GTCGCTGGTC GTCCAGTTAG GCAGTGGCCC ACGGATGCCG
ATGTGGGGTT GGGTGCGGTC TCCTCTGCTT CACATCGTGA TGGCAGCGGC TCTGTTGGTA
GGTGCTTGGT GGGGGCTTGA TCACGCGTTA GGTGAGGCAG TGGCCTCGCT CTTGCCGGTG
CAGGAATGA
|
|---|
| Protein sequence | MQKHSAAKVD IDALLQDTYL LVVELRHGTD AHSSPQLWSR CVADVEHVRA MLQQEGLDRR
SVDLISHAQC ALLDETVLAR AEGSAHEDWA METLQARFFS SHQAGESLYE DMRSALQEAS
VHPCVLIVFH RVLMLGFLGR YREANHPERQ QLLTAISAQV PPLDTSQSLV VQLGSGPRMP
MWGWVRSPLL HIVMAAALLV GAWWGLDHAL GEAVASLLPV QE
|
|---|
| |