| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3244 |
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| Symbol | |
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| ID | 6112196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3575726 |
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| End bp | 3576823 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641623029 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001750101 |
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| Protein GI | 170722413 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGAA CATCACAGTC AGCGTATTCC CGGTTGAAGG CCGAGGGCAT TCTGCATGTG
TTGGCTGAAC AGGTATCGAC GGCTAACGTC TACCGCTTCT GCCAAGTGCT GGAACAGGTT
CTGGCTGAAC AACCACCGCT GGGCAGCACT GCACATCCCA GTGATGACCG GGTCAGGTTC
CGGCCAGACC CTGGAATGGG ATTTCCAGCA GGCGAGTTGA AGGCCATTGA AATCGACGAG
TCTGCTCCAC ACCGACCGCT GACAGTGCGA ACCCGGCTGC TGGGTTTGTA TGGCGTCGAC
TCTCCATTGC CCACGGGCTA TCTGGATGAT ATCGCCCAGC GACGCGAAGG CCATGAGGCG
CTGGAGCACT TCCTCGATAT CTTCAACCAT CGGCTATTTA CCCAGTTCTA CCGGATCTGG
CGCAAGTACT CCTACCCGGC AACGTTCGAG CCGGGCGGGC GTGATGCGAC TTCACAGTGT
TTGTTGGGTT TGATCGGGCT GGGGATTCCC GGTACGGCAG AGCGTATCGC CACACCGATG
TCACGTTTCC TGGCCCTGCT CAGCGTGATG CGTCTACCCA CGCGTAACGC GGAGGGGATT
GGTGCGCTGG TGAAGTTGCT GGCGCCGCAC ACGGATACGC ACGTGACCGG GCATTGGCCG
CAGAGCGTTG TGCTTGAGCA GCCCGCCAGC CTTGCGCCAG CGCATCCGGT GACCTTGGGC
CAAGGCATGC CATTGGGCGC TGTCGGGCAC GACGCGAACA GCCAACTGCG CCTGCGGCTG
TGCACCGACG ACCAGAATGA GGCGCGTGAG TGGCTTCCTG GTGGCCGGCT GATTGCCGAT
CTGCGCGTGT TGCTTGAAGT GTATCTGGGG TGGCGTTGTA CAGCGCTGCT GCAGCTCTCA
ATTCCACGTG AGATGGTGCC GGCTCCTGTA CTAGGACGCA CTCGGTCGAT GCTTGGCATG
ACCGCTGTGT TGAAACGGGC AGAGGGCGTA CTCGCATCGG CTCAAGACGA CACGATCACG
ATTAACCTGG GCCGATATCA AGGTCTGCAG CCGAACCCTT GCAGGAAGGA GGTACAGCAT
GTGGCGTACC GTTTTTAA
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| Protein sequence | MERTSQSAYS RLKAEGILHV LAEQVSTANV YRFCQVLEQV LAEQPPLGST AHPSDDRVRF
RPDPGMGFPA GELKAIEIDE SAPHRPLTVR TRLLGLYGVD SPLPTGYLDD IAQRREGHEA
LEHFLDIFNH RLFTQFYRIW RKYSYPATFE PGGRDATSQC LLGLIGLGIP GTAERIATPM
SRFLALLSVM RLPTRNAEGI GALVKLLAPH TDTHVTGHWP QSVVLEQPAS LAPAHPVTLG
QGMPLGAVGH DANSQLRLRL CTDDQNEARE WLPGGRLIAD LRVLLEVYLG WRCTALLQLS
IPREMVPAPV LGRTRSMLGM TAVLKRAEGV LASAQDDTIT INLGRYQGLQ PNPCRKEVQH
VAYRF
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