| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3231 |
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| Symbol | |
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| ID | 6112183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 3565595 |
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| End bp | 3566536 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641623018 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001750090 |
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| Protein GI | 170722402 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.458607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGG TCTGCGATTT CGAATCAGCC GCACGCGAAG CGTTGGCGTT CCTCAAGCAG
ACCATTGGCT TCGATCAATG GTTCGTCACC AGGCTCAATG AGGGCGAATG CATTGTCATG
GAATCACTGG AAAACCAATC CTTGCAGGCG GGCCACATGC TGGATTGGTG CGACACGCTT
TTTGCGAAAA TGGTGGTCGG CGGCGCCCCT CGCATTGCCC CGGACCTCAG AGAACACCCC
GGTTATCAGG ACGCGTCATT CCTCCGAGAT ATTCCGACCG CAGCCTATAT GGGATTTCCG
CTCTATAAGT GCGACGGCGA CCTGTATGGA ACGATATGCG GTATAGCGGC AAGCCCGCAG
AAAGAGCTGG CACCCGAGCA AGTGCAATTG TTCGAGCTGA TAAGCCGGCT TCTAAATGCC
CTGCTGCAGA TGGAGATTCG AGCTGAGAAC CAGACCCGTC GCGCGGAACG ATTCGCCGCC
CAGGCCTTGC AGGACTCGAT GACTGGATTA TTCAACAGGG CCGGATGGGA TCAATTGATG
GCGAAGGAGG AACATCGATG CCGACGCCAT GGCAAGTCTT GCGTCGTCAT CGTGATCGAC
CTCGACGAAC TCAAGCAGAT AAATGACAGG GAAGGACACC TTGCCGGAGA CTCGCTCATT
CGCCGAACGG CGGAAGCGCT CTCGGAAGCG GCTCGAAGCG AAGATGTTGT TGCCCGGCTG
GGCGGCGATG AATTCGGAAT AATCGGCGTG AATTGCGACT TGGTGCACGG CCAGGTGCTG
CTGGAACGTG TGCTAGATCG TTTGGCCGAA CGCGGCATCG CCGCTTCGGT TGGAATGTCG
TCGCGCCCCG CGAAGGGTGG CATCAATGGA GCCTTCATCG AAGCGGATTT GAGGATGTAC
GAGCAGAAGC GCCTTAAATC ATCGAAGAAC ATTAAGGTTT GA
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| Protein sequence | MTEVCDFESA AREALAFLKQ TIGFDQWFVT RLNEGECIVM ESLENQSLQA GHMLDWCDTL
FAKMVVGGAP RIAPDLREHP GYQDASFLRD IPTAAYMGFP LYKCDGDLYG TICGIAASPQ
KELAPEQVQL FELISRLLNA LLQMEIRAEN QTRRAERFAA QALQDSMTGL FNRAGWDQLM
AKEEHRCRRH GKSCVVIVID LDELKQINDR EGHLAGDSLI RRTAEALSEA ARSEDVVARL
GGDEFGIIGV NCDLVHGQVL LERVLDRLAE RGIAASVGMS SRPAKGGING AFIEADLRMY
EQKRLKSSKN IKV
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