| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3222 |
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| Symbol | |
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| ID | 6112174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3556700 |
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| End bp | 3558109 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641623009 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001750081 |
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| Protein GI | 170722393 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0257406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.307548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTATC CAGCCCAATC GCGCGTGTTG CCCTATTTCG CTCTGTTCGG CCTGACCTTC
GCCCTGACCC TGGGCGGTAT CCTGGCACGG CCGATCGAGT CCCTGTCGCT GTTCTGGCCC
GTCAATGCGG TGCTGACCGG CGTACTCTTG CGCTACCCGC GCCAAGCCAC CCTGGTGGGG
TTCACTCTGG TCTGGCTGGG TATGGTCGCC GCCGACCTGG CCTGTGGCAG CGCCTGGCCG
CCAGCGCTGT GGTTCAACCT GTGCAACCTG AGCGTCGTGG TGACCGTGTG GCTACTGCTG
TCACGCCTGC CGCGCCTGCA CCGGCGCATG CGCAGCCCGC ATGGGGTGCT CAGTGTATTC
GGCGCGTGCG CGGCCGGTGC CATGGTGGCG GCCAGCCTGG CCTGCGTCAT GGCTACTCCG
TGGTTCGAGC AATCGTTGCG CGCCACCTGG CTGGCCTGGT TCAGCGAACA GTTCTCGACT
GCGGTGCTGC TTTTGCCGGT ACTACTAACG GCACCATCGG CACGCGCGTT GGTGCGCAGC
GGCGCCCAGG CTGTAGCCCT GGCCCCTTTA TTGGTGCTGC TGGCCTCGCT GGCCTTCAGC
ATCGCCTTCG GCGGGCCGGG GGCGATTGCC TTCCCGATCG CAGCACTGCT GTGGTGTGCG
TGGACCTACT CACCGTTCCT GGTTTCGCTT CTGACACTGA TTGCCGGCAG CACGCTGATC
GTCGCGGTGG CGCAAAACCT GATGCACTTC AGCGTGCCGC AAAGCGAGCT TGGGGTTACC
ACACTGATGT CGGCCCGAAT GGGCATCGCC ATGCTGATAC TCGGGCCACT GGTGGTCGCG
TGCGTCAGCC AGGCCAATCG CAGCCTGCTG GCGCGCCTGG CGCACCAGGC CACCATTGAT
CACCTGACCG GCGCGCTGAC CCGCAGCGCA TTCACCCGCC GCGCCAACGC CCTGCTCGAC
AGCCGGCAAA AACACGCACA GGCCCTACCG CTGACCTTGA TGATGCTCGA TATCGACCAT
TTCAAGTCGA TCAACGACCG CCACGGCCAC GGCGTGGGCG ATCAGGTGCT GCGCCAGTTC
GCCCGGACCC TGCAAGACCA ATTGCACGGC GGCGAGCTGC TGGCGCGCAT GGGTGGTGAA
GAGTTTGTGG TACTACTGCC GGGCCTGGCA CCGGAGCGGG CCAGCTTCAC TGCCGAACGG
CTGCGCAGAG CAGTCCAGGA CCTGCACCTG GCTAAGGGCG ACGGGCGCCC GCAGATCACC
GTCAGTATCG GCCTGGACGG CTGCGCCGGG CACGAGCCGG CCCCGACCCT GGACGAGCTG
CTGGCCCGTG CGGACCAGGC GCTGTACCGC GCCAAGGCAC ACGGCCGTAA TCGTGTGGAA
GTGGCAGAGA CGCAGCGCCA GGTGATTTGA
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| Protein sequence | MVYPAQSRVL PYFALFGLTF ALTLGGILAR PIESLSLFWP VNAVLTGVLL RYPRQATLVG
FTLVWLGMVA ADLACGSAWP PALWFNLCNL SVVVTVWLLL SRLPRLHRRM RSPHGVLSVF
GACAAGAMVA ASLACVMATP WFEQSLRATW LAWFSEQFST AVLLLPVLLT APSARALVRS
GAQAVALAPL LVLLASLAFS IAFGGPGAIA FPIAALLWCA WTYSPFLVSL LTLIAGSTLI
VAVAQNLMHF SVPQSELGVT TLMSARMGIA MLILGPLVVA CVSQANRSLL ARLAHQATID
HLTGALTRSA FTRRANALLD SRQKHAQALP LTLMMLDIDH FKSINDRHGH GVGDQVLRQF
ARTLQDQLHG GELLARMGGE EFVVLLPGLA PERASFTAER LRRAVQDLHL AKGDGRPQIT
VSIGLDGCAG HEPAPTLDEL LARADQALYR AKAHGRNRVE VAETQRQVI
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