| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3138 |
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| Symbol | |
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| ID | 6112088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3474392 |
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| End bp | 3475429 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622923 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001749997 |
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| Protein GI | 170722309 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCTT GCCCCCTACC CACCGACGAA GCAGCTCGCC AGCGCACCCT GGATGAGATG
CACCTGCTCG ATACGCCGGC CGAGCATTAC CTCGACACCC TGGTACGGCT TACCCAGCAA
CTGGCACACG TGGACACGGT GCTGATCAGC CTGATCGACC AAGAGCGCCA GTGGTTCAAG
GCACGTATCG GGCTGGCGGC CAGCGAGACG CCGCGCAACG TTTCTTTCTG TGGCTACGCC
ATCCTTGGGG AGGACACATT GTTGGTGCCC GATGCCACGC GTGACCCGCG TTTCGTCGAC
AACCCGCTGG TACTCAGCGC CCCCTATATC CGCTTTTACG CAGGGCACCC CCTGCGCGCG
GGGAATGGCA AGGCCATAGG GACATTGTGC ATGCTCGACC CCCGCCCGCG CACGCTGAAC
GAAACGCAGC AAGCGAACTT CAAGGACCTG GCCACGCTTG CAGAGGGTTA CCTGCAGCTG
CGTGGCCTGA TCCAGAGTAA CCGTGACTTG CGCCTGGAAA TGGACCGAGA GCAGCGCAAG
GCCATGCTTG ATCCGTTGAC GCAGTTGTGG AACCGCAACG GTCTGACAGC GTTTCAGGAC
CACGAGCGGC GCCGGGCAGC ACAGAGCAGC CAGCGCCTGG GGGCGATCTA TGCGGACCTT
GACCATTTCA AAAGCATCAA CGACAGGTAT GGCCATGCCA GCGGCGATCA GGTGCTCTGC
GAATGCGCCC GCCGCCTGCG CGCAGCCTTG CGCCCGGACG ATCTCGTGGT GCGCCAGGGC
GGTGAGGAAT TCGTCGCTCT GGTCATGGTC AACGACAGCG AAGAGCTCAA GGGTATTGCC
GAGCGGGTAC GGCAGATGAT CGGCAGCGAG CCGGTACAAC TTTCCACCGG CCCGCTACGG
GTCAGCCTGA GCATCGGCTG CACGCTGCTC AACGATGACG AACACCTCGA CCAGGCGCTG
GAACGCGCCG ACACCGGGCT CTACAGCGCC AAGCAGAATG GGCGGGACCG GGTGGTTTAC
GTGCAATCGG TAGCCTGA
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| Protein sequence | MPACPLPTDE AARQRTLDEM HLLDTPAEHY LDTLVRLTQQ LAHVDTVLIS LIDQERQWFK
ARIGLAASET PRNVSFCGYA ILGEDTLLVP DATRDPRFVD NPLVLSAPYI RFYAGHPLRA
GNGKAIGTLC MLDPRPRTLN ETQQANFKDL ATLAEGYLQL RGLIQSNRDL RLEMDREQRK
AMLDPLTQLW NRNGLTAFQD HERRRAAQSS QRLGAIYADL DHFKSINDRY GHASGDQVLC
ECARRLRAAL RPDDLVVRQG GEEFVALVMV NDSEELKGIA ERVRQMIGSE PVQLSTGPLR
VSLSIGCTLL NDDEHLDQAL ERADTGLYSA KQNGRDRVVY VQSVA
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