| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3054 |
|---|
| Symbol | |
|---|
| ID | 6112004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3391398 |
|---|
| End bp | 3393188 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641622839 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_001749913 |
|---|
| Protein GI | 170722225 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCGC CAACACAATT GATCAGCCCC CTGTGCCTTG CCCTGGCCAG CCAATGGGCT
TGGGCCGACC AGCCGCTGCC CGCGCCCCCG GAGCTAGGGT CAGGTTACCG CTCCGGCCTG
CAACCGGTTC ACGCCAACCG GCACATGGTG GCGGCTGCCA ATCCGCTGGC CAGCGAAGCC
GGGCGGGCGA TGCTGCGCGC CGGTGGCAGT GCCATCGATG CGGCAATTGC CATGCAGATG
GTGCTCACCC TGGTCGAGCC GCAGTCCAGC GGCATTGGCG GTGGGGCGTT CATCCTGTAC
TGGGACGGCA AACGGGTACA GGCATTCGAC GGGCGCGAGA CCGCGCCGGC AGCCGTCACC
CAAACGCTGT TCCTGCAACC GGACGGCACC CCGATGCCAT TCCGGGCAGC GCAGATCGGC
GGGCGCTCGG TAGGCGTACC AGGGGTGCTG CGTGCCTTGA AAATGGCGCA CGAGCAACAT
GGCAAGCTAC CGTGGCGTCA ACTGTTCGCG CCGGCTATTG CCTTGGCACG CAGTGGTTTC
CCTGTGTCCG AGCGCCTGCA CGCGTTGCTG GCGGGTGACC CTTTCATCGC CGATTCACCC
ACCATGGCCC GCTATTTCCT GGATGAGCAT GGCCAGCCGC TGGCGGTGGG AACGCTGCTA
CGCAACCCCG AACTTGCCCA TACCTTCGAA CGCATCGCGC AACAGGGCAT TGATGCGTTC
TATACCGGTG AAATTGCCGA AGCGATCGTC GCCCAGGTAC AGGGGCATGC CAATGCCGGG
CTCCTGTCAC TGGAGGATTT GCGCCAGTAC CAGGCCAAGG AGCGCACGCC GTTATGCGGC
CCTTACAAGG CCTGGCAGAT CTGCGGCATG CCGCCGCCAT CTTCAGGTGC AGTGACCGTG
CTGCAGACCT TGGGCATCCT CGAGGCGCTG CAGCACGCCA TGCCACAACG CGACCTTGCG
AAGCTACCGC CCAGCGTCAG TGCTTCGCCG GCAGGCCTTG AGCCTGCGCC GCTGGCCGTT
CACCTGATTG CCGAGGCCGA ACGGCTGGCC TACGCCGATC GTGCCCAGTA CCTGGCCGAC
AGCGACTATG TGCCGATACC GCTCAAGGCA TTGACCGCCC CGGCGTACCT GGCCGGGCGG
GCCGAGCTGA TCGGCGACTT CAGCATGAAA CATGCGCGAC CGGGCAAGCC GCAGGGCGCG
GACCTGGCCT TGGCCCCGGA CCGCTCGCCG TTGCGCATTT CCACCTCGCA CCTTTCGGCG
GTGGATGACA GCGGTCAGGC GCTGGCCATG ACCACTTCGG TAGAGGCTGC ATTCGGTTCG
CATCTGATGG TCAAGGGCTT CCTGCTGAAC AATCAGTTGA CCGACTTTTC CTTCATCCCA
CAGGAGAAGG GCAAGCTCGT TGCCAACCGG GTTGAACCGG GCAAGCGGCC GTTGTCGGCG
ATGGCCCCGA CCCTGGTGTT TTCGCAGGCG TCCGGGGAAC TGGTGGCCAG CCTCGGATCA
CCCGGTGGCT CGCAGATCAT CGGCTACGTC AACAAGGCGC TGGTGGGTTT GCTGGACTGG
CGGCTCGACC CACAACAGGC CAGCAACCTG CCCAACTTCG GCAGCCGCAA CGCCGGTACC
GAAGTGGAAG CCGGGCTGAC CAGCCCGGCG CTGGTCCGGC AATTGGCGGC CTGGGGCCAT
GAGGTGACGC CCATGACCAT GACCAGCGGC ATGCAGATCA TCCAGCGTAC CGGCCCAGGC
TGGGCGGGTG GAGCCGACCC GCGGCGCGAA GGCGTGGCGC TTGGCGATTA G
|
|---|
| Protein sequence | MPSPTQLISP LCLALASQWA WADQPLPAPP ELGSGYRSGL QPVHANRHMV AAANPLASEA
GRAMLRAGGS AIDAAIAMQM VLTLVEPQSS GIGGGAFILY WDGKRVQAFD GRETAPAAVT
QTLFLQPDGT PMPFRAAQIG GRSVGVPGVL RALKMAHEQH GKLPWRQLFA PAIALARSGF
PVSERLHALL AGDPFIADSP TMARYFLDEH GQPLAVGTLL RNPELAHTFE RIAQQGIDAF
YTGEIAEAIV AQVQGHANAG LLSLEDLRQY QAKERTPLCG PYKAWQICGM PPPSSGAVTV
LQTLGILEAL QHAMPQRDLA KLPPSVSASP AGLEPAPLAV HLIAEAERLA YADRAQYLAD
SDYVPIPLKA LTAPAYLAGR AELIGDFSMK HARPGKPQGA DLALAPDRSP LRISTSHLSA
VDDSGQALAM TTSVEAAFGS HLMVKGFLLN NQLTDFSFIP QEKGKLVANR VEPGKRPLSA
MAPTLVFSQA SGELVASLGS PGGSQIIGYV NKALVGLLDW RLDPQQASNL PNFGSRNAGT
EVEAGLTSPA LVRQLAAWGH EVTPMTMTSG MQIIQRTGPG WAGGADPRRE GVALGD
|
|---|
| |