| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3002 |
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| Symbol | |
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| ID | 6111953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3343283 |
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| End bp | 3345436 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641622789 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001749863 |
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| Protein GI | 170722175 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.527618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCA TGACCACTTT GGCGCTGCTC ATTGGCAGCG CAACCTGCGC GTGGGCGCAG
GATCAGACCC TGACACTGCC TGCCAGCAAC GTGACGGCCA GCGCCGACCA ACCGAAACCG
GCCACCGCCC TGAACCTTGA TACCCCCAGC GAAAGCGGCT CGCGCCTGAA CCTCAGCGCC
CGTGAAAACC CTGCTTCGGT CAGTGTGGCC GACCGCCAGA CCATGGAGCG TATCGGCGCG
CGCAACTTCC AGGACGCCGC CAACGCCCTG CCAGGGGTGA ATGCGTCGGC GCCGCCCGGC
TGGGGCGGTT ATGTGGCGTA CCGGGGCTTC AACGGTGCCC AGGTCAGCCA GCTGTTCAAC
GGCATCAACC TGCAGTACGG CGCAGCGGCA CGCCCGGTCG GCGCCTGGAT CTATGACCGC
GTCGAACTGC TGGGTGGCCC GTCGTCGTTC CTCAACGGCA GTGGCGCCGT GGGTGGCAGC
CTCAACGTGA TCACCAAGCT GGCAAACCGA GATGAGGATA CCTTCGAAGG CCGTGTCAGC
TACGGCCGCT ACGACACCTG GGAAACCGCG GTAGGCTTCA ACAAAGAGCT CAACAGTGGC
GACGGCCCAC GCCACTATGC GCGGCTCGAC TACAGCCGCA CCCACACCAA TGGCTATATC
GACCGGCAAG AGAACGGTGC CGGCAACCTG GCCTTCTCGC TGCTCAGTGA CATCAACGAC
CAGCTGTCGC ATACCCTTGC ACTTGAATAC CTGGAAGAAA AGGAAGACAG CCCCTACTGG
GGTACGCCGG TGTTGCAACC GCTGACAGGG ACCTTGCACA TCGACAAGAG CAACCGCTTC
AACAACTACA ATGTCGAGGA CGGCCGTTAC GAGCAGCGCA CCCGCTGGCT GCGCTCGATC
ACCGACTATC GTTTCGACGA CACCACCCAG TTGCGCAACA CGTTCTACCA CTACGACGGC
CAGCGCGATT ACCGCAACCT CGAGGTGTAC CGCTACAACG CCGACAACAG CGCCATTGCC
CGCTCCGGGG GCTACCGCCA ACGTCACGAC CAAGAGGTCA ATGGCAACCG CCTCGAGCTG
ACCCATCAAG GCCAACTGTT CGGCCTGGCC AGCGACTGGG CATTCGGTAT TGACTACAAC
CGCAACCAGC AAACCAACTA CCCACTGTCC AAAGGGGCCT TCGACATCGT CAACCCGAAC
GGTTTCGAGC CCGATCACTT CCTCGACATC CCCGGCATGG ACGCCCCGCG CAGCAAAGGC
CGAAGCACGA CCACCGACAC CTCCTCGGGT TTCGTCGAGA ACCGCACGCG CCTGACCGAC
CAGTTGTCGC TGATCACCGC CTTGCGCTAC GACCACATCG ACTTCGACGT TGTCGACCAT
GTCGCACGCT CGAAACTCGA CCGGCGCTGG GACGCGGTCA CTGGTCGCCT GGGCCTGGTC
TACGACCTGA CCCCGAACGT CAGCCTCTAT ACCCAGTACA GCACCTCGGC CGAACCACCA
GGAGGCACGC TGACCAGTGC GTCGATCAGC CAGGTTGGTG ACTTCGACCT GAGCACTGGC
CGCCAGGTAG AAGTTGGCAG CAAGTTCGAC TTCCTCGACG GCCGCGGCTC GGCCACCGCA
GCGGCCTATC GCATCGTGCG CAAGAACATC TCGGTGCCCT CTTCGACCGT GCCCAACACC
ACCGAGCAGG CAGGCCAGCA GACCTCCACC GGTATCGAGC TGGCGGCGTC GTTCAAGGTC
ACGCCCAAGC TGCTGGCGGC CGGTAACTTC AGCTGGGTGA ATGCCGAGTA CGACGAGTTC
AACGAGACCA TTGGCGGTGT GGTGTATTCG CGCAAGGGCA AGAACCCGGT GAACATCCCC
GACCGGGTGG CCAACCTCTG GCTGACCTAC GACCTGGCGC CGGGCTGGCA AGTGGGTGCC
GATGCCCGCT ACGTGGCCGC GGTGTACGCC AATACCGCCA ACACCGCCTG GGTGCCGTCC
TACACCCTAT ACGGGCTGTC CATGACCCAC GACCTGGACA AGCATGTGCA GCTCAGCGCA
CGGTTGCGCA ACCTCACCGA CGAGGTTTAC GCCCGCTTCA TCCACCAGAG CAATACCCAG
TACTACCTGG GTGAGCCGCG CAGCCTGGAG GTCGCTGTGC AGTGGCGTTA CTGA
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| Protein sequence | MFRMTTLALL IGSATCAWAQ DQTLTLPASN VTASADQPKP ATALNLDTPS ESGSRLNLSA
RENPASVSVA DRQTMERIGA RNFQDAANAL PGVNASAPPG WGGYVAYRGF NGAQVSQLFN
GINLQYGAAA RPVGAWIYDR VELLGGPSSF LNGSGAVGGS LNVITKLANR DEDTFEGRVS
YGRYDTWETA VGFNKELNSG DGPRHYARLD YSRTHTNGYI DRQENGAGNL AFSLLSDIND
QLSHTLALEY LEEKEDSPYW GTPVLQPLTG TLHIDKSNRF NNYNVEDGRY EQRTRWLRSI
TDYRFDDTTQ LRNTFYHYDG QRDYRNLEVY RYNADNSAIA RSGGYRQRHD QEVNGNRLEL
THQGQLFGLA SDWAFGIDYN RNQQTNYPLS KGAFDIVNPN GFEPDHFLDI PGMDAPRSKG
RSTTTDTSSG FVENRTRLTD QLSLITALRY DHIDFDVVDH VARSKLDRRW DAVTGRLGLV
YDLTPNVSLY TQYSTSAEPP GGTLTSASIS QVGDFDLSTG RQVEVGSKFD FLDGRGSATA
AAYRIVRKNI SVPSSTVPNT TEQAGQQTST GIELAASFKV TPKLLAAGNF SWVNAEYDEF
NETIGGVVYS RKGKNPVNIP DRVANLWLTY DLAPGWQVGA DARYVAAVYA NTANTAWVPS
YTLYGLSMTH DLDKHVQLSA RLRNLTDEVY ARFIHQSNTQ YYLGEPRSLE VAVQWRY
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