| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2997 |
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| Symbol | |
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| ID | 6111948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3338429 |
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| End bp | 3339568 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641622784 |
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| Product | porin |
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| Protein accession | YP_001749858 |
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| Protein GI | 170722170 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.438361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTT GCATCACTCG CACTGTGTCG TTGCTGTTGA TGAGCCTAGG GATTTGTCCT
GCCATGCAGG CACAGGCCGA GGGCTTCCCT ACCCTCAACC GGCTAGCTTC CGGGTTCGGT
TACTACGGGG TGGATCAGGG GTTCGATGAC AAGCTGAAGA TCTACGGGAC CGTGGATGCA
TTCGCCAGCT ACCACGACTC TCAGCACCAC TCAGGTTTTC AAATGGCGGG CGGCGGCGCC
TGGACCAACA AACTCGGGTT GTATGCCCGA AAAGCACTTG CCCCCGATAC GGTGCTGGAA
CTGGACGTCG AAGAAGGCTT CAATCTGAAC GGCAAGGCCC TAGAAGGGAC GTGGGACAAC
ATCGGCACGC TGCGCCTGGC AACGCTCGCC CTGCGCTCAC GGAGCCTGGG CAGGCTTGAG
TTCGGCAAAA CCTACGGGGT GGGGACCCCG ACCTACGCCG ACCCGTTTCT GGCGGCATAC
GGCTCACCGT ATACGTTTCT GTCCATACCT GCGGCCGGCA AAGGCGCCTA CTATCTCGAC
CTGCGGCCCA AGCACACCCT GGCCTACACC AGCCCGAACA TGAACGGCTT CAGCCTGGCA
ACGGCCTTGA GCTTCGGCTT CGATGACGTC GCCAGCCAGG GGCGTACGGT GCGTGGTGGG
GGTGCGAAGC TGCAATACCG AAATAGCCGT GTGATGCTGC TGGGGTCTTA CAACCTGTAT
TACAGCGACC CATGGGACGA TGGTGGCAGC TCACGCCAGA CTGCCAACCA CTACACAAGC
CTGTCGGCGT TCTATGATTT CGGCCCGTTG GCCACCAGCC TGACCTGGCA ACGCCAGGAT
GTAGACCAAG CGGGCACACC CAGTACCACC GTGTACACCT TCGGCCTGAT GGCCCCGGTG
GGCAAGCTTG ACGTGCTCAG GCTGGCGGTG GTCCAGCGGA CGGTATCGGC CCGCGAAAAG
GACGCGCTGG GGGCAGTGCT TGGCTACGAC CATTTCTTCA ACCCGCGCTG GGCCGCCTAT
GCGCGCCTGG GTGTGATCGC CAACCAAGGC GCGTCATCGG TGACCTACGC AGGCACTCCG
ATTGATCAGG TGGGAGATGA CCCAAGCAAT ATTTCACTAG GCATGTACTA CCACTTCTGA
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| Protein sequence | MNTCITRTVS LLLMSLGICP AMQAQAEGFP TLNRLASGFG YYGVDQGFDD KLKIYGTVDA
FASYHDSQHH SGFQMAGGGA WTNKLGLYAR KALAPDTVLE LDVEEGFNLN GKALEGTWDN
IGTLRLATLA LRSRSLGRLE FGKTYGVGTP TYADPFLAAY GSPYTFLSIP AAGKGAYYLD
LRPKHTLAYT SPNMNGFSLA TALSFGFDDV ASQGRTVRGG GAKLQYRNSR VMLLGSYNLY
YSDPWDDGGS SRQTANHYTS LSAFYDFGPL ATSLTWQRQD VDQAGTPSTT VYTFGLMAPV
GKLDVLRLAV VQRTVSAREK DALGAVLGYD HFFNPRWAAY ARLGVIANQG ASSVTYAGTP
IDQVGDDPSN ISLGMYYHF
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