| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2968 |
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| Symbol | |
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| ID | 6111919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3296196 |
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| End bp | 3301073 |
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| Gene Length | 4878 bp |
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| Protein Length | 1625 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622755 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_001749829 |
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| Protein GI | 170722141 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.813294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATG CGATTGCCCT GCACCAAGAC CTGATCACCC AAGCCCTGCC CGAATGGGCC
CGTACCCTGC ATCCCACGCA TGCCGGAGGC ATCGTGCAAC GCGCACGCGC GGCCTACGTG
GATGAAGATG GCGCGCCCTA CAGCTGGTAT GCGACCGCGC AGCCAGAGCA TCGTGAGCAG
TTGCGCATGC TCATCGGGCG ACGTGACAGC TGCGTTACCC AACTGAGCAA CGCCCTTGTC
GGTTTCAAGG ACATCACCAC GTTCTGCAGC CCTTTGCTGA GCAGCCGGCT GGGTCTGAAA
GTGGCCGTGG ACAAGGCCCA GTACAACTTC CAGCCTTTCG AGACGGTCAT CAACTATGGA
CCGGGCGCCG GCAGCCCGGA AGTACCGCTG GGTGCGCCCC TGCAGGAAGA GACCTTTGTG
ACCCGCCCCG TAGGCCCTCG TCAGTCGCGC AGCTTGCTTG AAGCCGCCCT GCACAATTTC
GAAGGCATCG AACAAGTCGG GCCTTACAGC GAGCTGACCT GCGCGCCGGG CGACGACACG
CCCTTGGCCG GTTTGTCCAT GGCGCAATTC GTGCGGCATT GCCGCAAACT GGACCTTGGC
CAGCAATATC AGGATCACCT GCAGGCCATC TATGAAGGCC CGCGCAAGGA GGAAATCAGT
CAGCTGTCGA TGCGTGCCAG CCAAGAGGAA CTGCGCGTGC AGGCGTACAT CGCCTCGCTC
AAAGGCCTGC TGAGCGCAAA AGGCCTTGCC GCGATCAACG ACCTGTGCGA CGGCGTACGT
CAACCAGCTT ACGACGGCCA TCCCCTGCAT AGCTGGCGTT TGCGCCTGTT CGACATCCCC
TTGCACGAGA TGCTGTTCAT CGGTGCCGAT AGGGATGATG CAATCACCCC CTGCATCGTC
CACCTCCCGG GCGACAAAGA ACACCCTGTG CGCGAATACC CCTCCCGCCA GGCTGCTGCC
AAGTATTTCC GAGAGCGGCT GCTGCACAGC ACGTTCCGCG AAACCGTGAT CGGGCTCGCC
TACAGACGCG ATCAGCCCAT GCTGGCGGGC AAGCTATGGG ACGCCCTGTT CGAGATCGAT
GAGCAAGGCA GACAACGGCC ACGCAAGTCG CCGAACTTCC ACATCTTGCC ATCGCAGACA
AGAAGTGAGT TGTGGCCAAC CCTCTACCAC GCCCACCTCG CCCGCCTCAA GGCCGACGCC
AGGGTCCTGG CTGTCCCAAC AGCCGATGTC GACGCCGAGG CTTATCAGAA ACACCTGCGG
TACTGGCTGG ATATGGGCAT GAATGTGCTG AACATCGCCG CCTTCTTCGT GCCCGGCCTG
AACGCGGTAA TGACCGGCGT TTTCGCTTAC CAACTGATGG ATTCGGTGTT TACCGGATTT
GAGGCCTGGG AAGAAGGTGA CACTGCACAA GCACTGGCCC AGGTTGAATC GTTGGTAATC
AATGCTGCCG CGATCGCCGG TTTTGCCGGC GGAGCCAAGG TCATAACGGC GTCAGGTTTC
GTCGACGCCA TGCAAGCGGT ATGGCATGAA GACCGCCTGC AACTGTGGCA TCCGGACATG
AGCCCCTATG CCAGCCCGAT TACCCTGCCA ACAGAAGGCC TGCCCGATGA ACTTGGGCAT
TACGAGCTCG AGGGCAAACG CTACCTCGTG CTGGAAGGCA CGCCCTATGA GACTTTCCAG
GACCCTGACC AGCAATGGCG CATCCGCCAC CCCAGCGACC CAGCAGCCTA CGCGCCACTG
TTACACCATC AGGGTGACGG GCGCTGGCTA TTGGCCCATG AACAGCCTTT GCAGTGGGAC
GATACGCAAT TGCTGCAGCG TCTTGGCCAC TCAAGCCAGG GGCTGGACAG CAGCGAGCTG
GTCACGGCGA TGCGCAGTAC CGGTACAGAC GCCAGTGTGC TGCGCCGCAT GCATGCCAAA
GGGCTGCGCC CTCCGGCTCT GCTGGAGGAC ATGCTGCTGC GCATACGCCT GGACAACCAG
GTGCAGAACC TGATCCACCG AGTGCGGCAA GGCCTTTCAC TGGCTGCCTA CAAGAACTAC
GCGCTGCCGG AACTGGTGCG TTTGCCAGGT TGGCCGCAGG ATCACGTGCT CAAGGTATTC
ATCGGCCCCG AACCTTGGGG TGATGCGGTG CGGTATAGCG CCCTCGACAC CCCTGGTCAG
GTGGAAATCA GCATGACCCG CTCGGATCTG GAGAATGGTC AATTGGGCCA TGCAGTCGTA
ACGCAACTGG ACGAGCGGCA CGTGCGTGCC ATGCTCGGCG ACCTGCCTTC TGAGCTGTGG
GCCTCGGCCC TGAACACCAG GCTGGGCGAA CAGCTGCAAA GCCAGCGCGA GGCGATATAC
CACAGTATGC TGAGCAACCA TGCCCAGCCT GCAAGTGACG CGACAGAGCC ATTGCGCAGG
CAGTTCCCCG GTGTACCACC TGGTGCCTTG GAAGAGGTCA TCCAGGCGGC CAGCCATACC
GAACGCGCAC GCCTGGCAAC TGGACGTGTG CCGTTACGGA TAGCCGAAGA AGCGCGCCAG
TTGCAAGCCC GCACACGGCT GGACCGCGCC ATCATGGGCC TTTACCGCCC GCATTTGGCC
AATAGCGACA GCCAGCAACT GACCGAAGGC CTGCTGGGCC AGCATCCTCA GGCAAGCGCT
GCGCAACTGC TTGAGGTTGC GCTCGCCGAC CGCGAAAACT GCGCCGCGCT GATTGGCCAG
CAGCCCATCA AACCTGGCTA TCGTTCACCT TTGCGCCTTG CCGCCGGCCG TATCGGCTAC
CCGCTCAGCG GCCGAGGTGC CGGGCGCGCA GCGCAACGCC TGGGCGCGCT CTTTCCTGAG
CTCGACCACA GAGAGCTCAG CGCGCTGCAG TCAGAACTGG CACAGGCGGG CAACCTGGGA
ACGCAGATCA GCCGGCTGGA AGCCGAGCAA CGCACCTTGC GCCAGGACCT GAACAGGTGG
GTTGGCGGCG CGACTGAGCT GGACGAGCGC TTCGATCGCT CACACTTTGC CGAGCGGGTG
CTGGCCGCCT GGGGCCGTGA AGGTGGCGCT GCCCGCGAGG CGCTGACGCT GGACCGCATG
CAGTTGCGCA GGCTGCCAAC GCTCACGGCA CGCTTGCCGC ATGTTCGCAC CCTTACACTG
GAAGGGCTCA GACTCGAGCG CCTCGAAGGA GACTTTCTGT CATGTTTTCC TGGCCTGCGC
ACACTGGAGG TAGCCGGCAA CCCGGACATG GACGCCGAGG CCTTGTTCCA GGCACTGAAA
TCTGCACCTG GACTACATAC GCTCAAACTG AATGGAAATG CTTTACCGGC CCTTTCGCCA
CTGGCTCATG AGGCCCTGTC GGCCATGCCC GGCCTGCGCA ACCTCAACCT GCGCAGAAAC
CGCCTGCAAC TGGACGCTGC CAGCCTCGCC TTGCTGGCTG GCCTACGGCT GGATGTACTC
AACCTGGGCA GTAATGCCAT TACCCTCGAT CAAACCCTGG CCTCGGCCTT CCAGGCCATG
ATCCATCCCC AGCAACTCTT ACTGGATTTC AATACACTGG GCCATGCCCC CGACGTCAGC
TACATGGGTC GCCTGCGCAC CCTGAACCTG AACAACAGCG ACCTGCGGCA ATGGCCCGAG
GGGTTGACGC GGCTGATGAG CCAGCATCAG TACCAGCTGC GTCACCTGGA CCTGTCATTC
AACCGCATTC GAACCCTGCC CAATCTTGCG GACATCCTGC GCACCCCGTT CGCCCGGGAT
GTCGCTGCGC GAGCGCCCGA GCGGCGCTGG CACCTAAACT ACAACACGCT TGAAGCGCAA
ACCCGTGCGC AACTGCGTGC CAGCGGCGTC CAGGTCTTTG AACACGCACC CGATATGCCT
GAATGGCAGA CACTGTGGCG CAGTACCGCC TCCACCCACC AGGACCAACT CTGGTCCGAT
CTGTTCGACC AAGGGGAAAA CGGTGAATTG CTTGGGGTAC TCGAACGCCT GGTACAGTCA
GCCGAGGCGC AGCATGAGCC AGATAACCTG GGCCGCAGAG TCTGGGCCCT GCTGGAGAAA
GCCGGGCGCG ACACGGCGCT GCGCGAACGC CTTGCCGACG TGGCGCACGC GTATCCGCCA
ACCTGCGGTG ACGCCGGTGC CGATGCCTTC AGTGCACTGG AGATCGAAGT GCTGGCACAC
GAGACAGCAG GCCATAGCGG TGAGCAGGCC ACGACCCTGC TCACGCTATA CCGCAAGCTT
TATCGCCGGG ACATCGTCAA CGAACTGGCC GATCGCATCA GCCTGAGAAG AACATTACGC
AAGCAGGCGC TGCAAGACGG TGTGTTCGAT GCGGATCTGC CACAGTACGA CTCACTGGAT
GATCCAGCCG CGTTTCCTGA CGTCGACCTG GAAACCGGGC TGGTCGACGA TATCGAAGTC
CGCCTTGCCT TGCGTCAGTC CCTTGCAACC CGGCTGGACT TCCCTGAACC CAGCCGCGGC
ATGCTCTACC GGGATACAGC CAGGATCAAC AGCACCATCA TCGAGAAGGT ACACAGCGCA
GTGCTTGCCC GGGATGCCAG AGCCGACACA CGGCAGGCAT GGATACTTGG GCAGGCAGGC
TGGGTGCAAT ACCTCAAGCG TCACAATGCC GAAGCATTCA GCCTGCTCAC CGATTTCTGG
CGAGTGGGCC ATGACTACCT GTTCCATTGC CTGGACGACA GCCATGAACC CGTAGCCCGC
CTGGACACCT CGGTGCTTGA AGCCCTGGGG CCTGTGCTGC CGCAGAACCC GCTGGACGAA
AACGGACTGC TGCGGCGCGT GCCGCTCAAT GACGGCCAGT TCGACCAAGC CATGCGCGCC
TTGAACGAGG AGCAGCAAAA GGTCGAGCAC GGCCTGCTGC TCAGCCTCAC CCGGCAGGCC
GAAAAGCTCG CTGGCTAA
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| Protein sequence | MQNAIALHQD LITQALPEWA RTLHPTHAGG IVQRARAAYV DEDGAPYSWY ATAQPEHREQ
LRMLIGRRDS CVTQLSNALV GFKDITTFCS PLLSSRLGLK VAVDKAQYNF QPFETVINYG
PGAGSPEVPL GAPLQEETFV TRPVGPRQSR SLLEAALHNF EGIEQVGPYS ELTCAPGDDT
PLAGLSMAQF VRHCRKLDLG QQYQDHLQAI YEGPRKEEIS QLSMRASQEE LRVQAYIASL
KGLLSAKGLA AINDLCDGVR QPAYDGHPLH SWRLRLFDIP LHEMLFIGAD RDDAITPCIV
HLPGDKEHPV REYPSRQAAA KYFRERLLHS TFRETVIGLA YRRDQPMLAG KLWDALFEID
EQGRQRPRKS PNFHILPSQT RSELWPTLYH AHLARLKADA RVLAVPTADV DAEAYQKHLR
YWLDMGMNVL NIAAFFVPGL NAVMTGVFAY QLMDSVFTGF EAWEEGDTAQ ALAQVESLVI
NAAAIAGFAG GAKVITASGF VDAMQAVWHE DRLQLWHPDM SPYASPITLP TEGLPDELGH
YELEGKRYLV LEGTPYETFQ DPDQQWRIRH PSDPAAYAPL LHHQGDGRWL LAHEQPLQWD
DTQLLQRLGH SSQGLDSSEL VTAMRSTGTD ASVLRRMHAK GLRPPALLED MLLRIRLDNQ
VQNLIHRVRQ GLSLAAYKNY ALPELVRLPG WPQDHVLKVF IGPEPWGDAV RYSALDTPGQ
VEISMTRSDL ENGQLGHAVV TQLDERHVRA MLGDLPSELW ASALNTRLGE QLQSQREAIY
HSMLSNHAQP ASDATEPLRR QFPGVPPGAL EEVIQAASHT ERARLATGRV PLRIAEEARQ
LQARTRLDRA IMGLYRPHLA NSDSQQLTEG LLGQHPQASA AQLLEVALAD RENCAALIGQ
QPIKPGYRSP LRLAAGRIGY PLSGRGAGRA AQRLGALFPE LDHRELSALQ SELAQAGNLG
TQISRLEAEQ RTLRQDLNRW VGGATELDER FDRSHFAERV LAAWGREGGA AREALTLDRM
QLRRLPTLTA RLPHVRTLTL EGLRLERLEG DFLSCFPGLR TLEVAGNPDM DAEALFQALK
SAPGLHTLKL NGNALPALSP LAHEALSAMP GLRNLNLRRN RLQLDAASLA LLAGLRLDVL
NLGSNAITLD QTLASAFQAM IHPQQLLLDF NTLGHAPDVS YMGRLRTLNL NNSDLRQWPE
GLTRLMSQHQ YQLRHLDLSF NRIRTLPNLA DILRTPFARD VAARAPERRW HLNYNTLEAQ
TRAQLRASGV QVFEHAPDMP EWQTLWRSTA STHQDQLWSD LFDQGENGEL LGVLERLVQS
AEAQHEPDNL GRRVWALLEK AGRDTALRER LADVAHAYPP TCGDAGADAF SALEIEVLAH
ETAGHSGEQA TTLLTLYRKL YRRDIVNELA DRISLRRTLR KQALQDGVFD ADLPQYDSLD
DPAAFPDVDL ETGLVDDIEV RLALRQSLAT RLDFPEPSRG MLYRDTARIN STIIEKVHSA
VLARDARADT RQAWILGQAG WVQYLKRHNA EAFSLLTDFW RVGHDYLFHC LDDSHEPVAR
LDTSVLEALG PVLPQNPLDE NGLLRRVPLN DGQFDQAMRA LNEEQQKVEH GLLLSLTRQA
EKLAG
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