| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2924 |
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| Symbol | |
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| ID | 6111875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3234177 |
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| End bp | 3237965 |
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| Gene Length | 3789 bp |
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| Protein Length | 1262 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622711 |
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| Product | hypothetical protein |
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| Protein accession | YP_001749785 |
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| Protein GI | 170722097 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.240221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.200009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TCGCCCTCCA CAACCCTCAT CAGCAACTGA TCCAGGATCA GCTACCGGCC
TGGGCCGGAA CTGTGCAACC TGAGCACTGG CAGCGCTTGC GCGAGAGCGT GTTGCCCGAG
CAAGGCCTGG ATGGTCAAGC ACCATGGTTC GCCAATGCTG CACCCGACCT GCGCGAAGCA
GTGCTTGCCA GCCAGCGCCG CCTGGACAAC TCGCAATACC AACTGGCGCG TGCCCTTGCG
GGGCTGCAGA ACGTTGCCGA ATTTGCCGAA GCCTTGCTCG ATCAACGACT GAAGGCCGCG
CACCAATTGT CAGTCCCGCT GCGCACCACC CAGCTCATCC ATATTCAGCA CAGGTTCAGT
TTCGGCACCT ACGTCAGCGA CCACAAAGCG ACCAGCCTGC TCGAAGCCGC CCTGCACAAC
TTTGAAGAAC AGGCCACGTT CAGCCATGAC AGTGCCCTGG CACTAGCCGG TGATGCACAG
TGCGAAGCCA CCACGGTCGT CGGCCAGACC ACATTGGGCG ACAGCGACAC GCTGGTTGAT
ATCGACCTAC CGTCCGAGTC ATACCGTCTC AAGCCGCTGC CGCTCACACC CAACGACTTC
GCCCGCAGTT GCCGTGACCT GGATATTGGG CAGCGTTATC AGGAACACCT GCAGACGATC
TTCGAAACCC CTTCAAGCCC GGTACGTGCA GACTCGATGA CGACCCTGCG CGATCGCCTG
CGCCTGGCCG CCGACATGGC TTTCCTGCGC CACGCCATCA CCGGCACCGG CCGTGATGTC
ATCGAAGAGC TTTTGGCCGA GGCTCCCGTG CGCTGCTGGC AGCCATCGCT GTTCGGCATC
ACGCTCCACG AAGTACTGAT CATTGACGCT GGGCAGGCGG GGTTGTTGTT GTACCTGCCG
GGTGATGAGC AGCGCCTGCT GCAGTTCTCC GGCCTTGCAG GCGTGCATGC GCATCTCGCC
ACCCATTTGC TGCAAGCAGA TTACCGACGC GGTTTCCAGC GATACGTATC ATCATTGCAG
TGCTATCGCT TCCTCGACCT GCTGCACCAG AACCTCGACG CCGCAGGTAC CAGCCCCACG
GATCAACTGT GGTCGATGCG CGAGGGAGCC GACCTGCACC TGACCCTTGC CCCCATCGAG
GCGCCACTGC TGGCTTTCCT CTATGACGAC CATGTGGCAC GCCTGAAGGC CGAGGCCGCA
GCCGTGGCAG TGCCTACCGC AGAGGTCGAC AAGCAAGCGC ACCAACGGCG CATTGCCCAG
TGGCAAAGCA TGGGCATGGA CGCGCTGATG GTTGCAGGTT TCTTCATACC CGGAGTTGGC
ACCCTGTTGA CAGGGGTAAT CACCTGTCAG TTGCTTGGGG AGGTGATCGA GGGTTACCAG
GCGTGGAGCA TCGGCGACCG CCATCTGGCT TTGCAGCACA TCGAGACGGT CGGTTTGAAC
CTTGCTGCCA TCGGCGGGTT GCATGCAGCA GGCAAGGTGC TGCCGAAGCT GTTCAACAGC
GCGCTGATGG AAAGCCTTGA ACCGGTGAAG CTGCAGGACG GCAGCAAGCG ACTCTGGCGT
GCGGACCTGA CAGGCTATGC GAGTACAGTA CAGTTACCTG CAGAACTCGA AGCTAACCCG
CAAGGGTTAC AAGCCCATCA AGGCAGGCAG TTCATCCGGA TGGATGGCCA ACAGTACGAA
ATTGCCCAGG ATGGTACCGA CCAACGCTGG AGGGTTGTCC ACCCAAGTGA CCCCGAGGCC
TACCGACCGT TGCTGGAACA CAATGGCGAG GGCGCGTGGC GGGGGGAGCA CGAGATACCT
CAGGACTGGT CCGACAGCCA GTGCATACGT CGCCTAGGCC TGCCCGTGGA TACGCTGGAC
GATGTGCAAC TGCAGCAGGC CATGGTGATC AGTGGCGTGG ACCGGGCACG TTTGCAGGCA
GTACATCTGG CCGGTGAGCC CACGCCTGCA CTGCTTGCCG ATACGTTGGA GCGCCTTACG
CTGGCTCGGC AGATGCCCAA GCTGGACGGT GCGGCACTGA CGAGCATTTA CCGGCGTACG
GCGAGCACCG CCGAACAGCG GTTGTGCGAG ACCTATGCGC AGTTGACCCC ACCCCTGGCC
AGGCGCCTGC TGACACGACT CTCGCCAGAG GCGTTGGCCG ATTGGCACTC GCAGGGTGCA
CTACCCGCCT GGCTACACCA GCAAGCCGAG CAGATTACCC GCGATTTACC CCTGGCCCGT
GCCTTGGAAG GTCTATACCA GCCACGCCTG GCCGACAGCA ACAGCGAGCG CCTGCTACTC
GCCTGCATTG AGCGGCACTC CAGCTGGCCA GAACACTTGC GCCTGGAAAT TCGCGAAGCC
AATCCCGAGG GTCGCGTACT GGCGGCCATC GGTGAGGAAC AGGCCAGCGA GCGTTGCGTG
TTGCTCAGGT CTGGCATGGG GTACGAAGCC TTCAAGGGCG AACGCCCGGA AGCCGGGCCC
GTGCATACCG ACGCATACCA GGCGCTGTAC ACCGCAGCGC CATCGAAACT CAAAGAGATG
TGGGGCAGCG CTGAAGCGTT GGGTGAGCGC ACGCAACGCC TGGCCGCTGC CGAGCGGGAG
AAATGGCCAG TGCGCCTCTG GGGGCCGCAG GCCAAGCGCC CTACCCTGCG TCACAGGTTG
CGCGGTGGCG CACCTGTCGC TCCACTGGCA CCCAGCTCAC CGTTCTTTAA CCAAAGCGTG
CCGGCGCGCT TGCGCAGGCT CTACCCCAGC ATCACCCAGG AGCAGGTCGA GCGCTTACAG
GCAGACTGGA GTAACACGAT GCGCTCTGCG GAGACAGAAT TGCGCATTCG TGAAGACGCC
TTGAGACAGT TACGCACCGA CCTTGATCGA TGGGCAACGG GCGCTCCCCG GCGCCAGCCC
GCCGTGCGCA GGATGCTCAA CGCCTGGCAG CAAAATTCGA TACGTGTGTT GTCCACCGGC
CAGCGCATCC ACTCCCTCGA CCTGAAAAAC TTCGAACTTG AAAACAGCGA CTTGGCGGCC
CTCGCGCTGC CAGCGGGTTT CAGCCACATC GCGGACCTTG ACCTCAGCGG TAACAGCGCA
CTGAGCGAGT TGCCCGCACA ATGGCTGCAT TGCATGCCCG AACTGCAGCG CCTGACCTTG
AGCCGTTGTC GCTTCGCCGC GGTTCCAGAG GTTCCGGTAC CCGGTAACCT GCAATGGCTT
GACCTTGAAT ATAACCGCAT CAGCTGGGAC GCACGCGCGC AGGCAGCACT GGAGCGACTG
AGTGGGTTGA GGGTGCTGGA TCTGTCCCAG AACCCGTTGC TCCACGCGCC GAACCTGCAG
AACCTTCCAA GGCTCGGTTC GGTGTTCATG GTCAACTGCG ACCTGACCGA ACTCCCCCAA
GGCCTTCAAC GACTGGAGTC GGTGTTGATC ATCGACCTGT CCGAGAACCA GTTCCAGCGC
CTTCCACGGG GGTTTACCCT GCCTGTGGCC AGCGCCAATG CCTTGGCCCT GGAAAGCCCG
GGGCTAGGCC TGCCCATTCG CGAGCAGATT GAAGATTATT ACCAGCTACA TGGTGCCGAC
CTGCTGGTGT CCGATATCGA CTACCAGCCA CTGCTGGCCG AAGCCAGTGC CCGGCGACTG
CAGCTCTGGT CGCGGGTGCC ATTGCACTAC CGTCGAGAGT TGCGCCAGCT GATCGAGGAC
ATTGCTGATT TCGATGACTT CGATGCAGGC CTGGAGGCAC TGTGGCGCTG CCTCGAACGC
ATGGATGCAG ACCCCGCATT CCGCGAGCTG GCGCTGGATT CGCCGGCTGC CATGCTGCTG
GATCTCTGA
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| Protein sequence | MTDLALHNPH QQLIQDQLPA WAGTVQPEHW QRLRESVLPE QGLDGQAPWF ANAAPDLREA
VLASQRRLDN SQYQLARALA GLQNVAEFAE ALLDQRLKAA HQLSVPLRTT QLIHIQHRFS
FGTYVSDHKA TSLLEAALHN FEEQATFSHD SALALAGDAQ CEATTVVGQT TLGDSDTLVD
IDLPSESYRL KPLPLTPNDF ARSCRDLDIG QRYQEHLQTI FETPSSPVRA DSMTTLRDRL
RLAADMAFLR HAITGTGRDV IEELLAEAPV RCWQPSLFGI TLHEVLIIDA GQAGLLLYLP
GDEQRLLQFS GLAGVHAHLA THLLQADYRR GFQRYVSSLQ CYRFLDLLHQ NLDAAGTSPT
DQLWSMREGA DLHLTLAPIE APLLAFLYDD HVARLKAEAA AVAVPTAEVD KQAHQRRIAQ
WQSMGMDALM VAGFFIPGVG TLLTGVITCQ LLGEVIEGYQ AWSIGDRHLA LQHIETVGLN
LAAIGGLHAA GKVLPKLFNS ALMESLEPVK LQDGSKRLWR ADLTGYASTV QLPAELEANP
QGLQAHQGRQ FIRMDGQQYE IAQDGTDQRW RVVHPSDPEA YRPLLEHNGE GAWRGEHEIP
QDWSDSQCIR RLGLPVDTLD DVQLQQAMVI SGVDRARLQA VHLAGEPTPA LLADTLERLT
LARQMPKLDG AALTSIYRRT ASTAEQRLCE TYAQLTPPLA RRLLTRLSPE ALADWHSQGA
LPAWLHQQAE QITRDLPLAR ALEGLYQPRL ADSNSERLLL ACIERHSSWP EHLRLEIREA
NPEGRVLAAI GEEQASERCV LLRSGMGYEA FKGERPEAGP VHTDAYQALY TAAPSKLKEM
WGSAEALGER TQRLAAAERE KWPVRLWGPQ AKRPTLRHRL RGGAPVAPLA PSSPFFNQSV
PARLRRLYPS ITQEQVERLQ ADWSNTMRSA ETELRIREDA LRQLRTDLDR WATGAPRRQP
AVRRMLNAWQ QNSIRVLSTG QRIHSLDLKN FELENSDLAA LALPAGFSHI ADLDLSGNSA
LSELPAQWLH CMPELQRLTL SRCRFAAVPE VPVPGNLQWL DLEYNRISWD ARAQAALERL
SGLRVLDLSQ NPLLHAPNLQ NLPRLGSVFM VNCDLTELPQ GLQRLESVLI IDLSENQFQR
LPRGFTLPVA SANALALESP GLGLPIREQI EDYYQLHGAD LLVSDIDYQP LLAEASARRL
QLWSRVPLHY RRELRQLIED IADFDDFDAG LEALWRCLER MDADPAFREL ALDSPAAMLL
DL
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