| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2859 |
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| Symbol | |
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| ID | 6111810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 3162426 |
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| End bp | 3163283 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641622646 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001749720 |
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| Protein GI | 170722032 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.170147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.262214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACT ACCCTACCCC TCCGTTTCCC TCCCAGCCGC AAAGCGTCCC GGGTTCACAG
CGCAAGATGG AGCCCACCCC TGACTGTGGC GAGCACACCT ACACCGGCAA CGGTCGACTC
AACGGAAAAG TAGCGCTGAT CACCGGCGCC GACAGCGGGA TCGGGCGTGC AGTCGCCATC
GCATACGCCC GCGAAGGCGC AGACATTGCC CTTGCCTATC TTGATGAACA CGAAGATGCG
CAGGAAACCG CCGGTTGGGT CCACGCTGCT GGCCGGCAAT GCCTGCTGCT GCCTGGGGAT
CTGGCCCGGA AACAGCACTG CTACGACATC GTTGACAAGA CCGTGGAGCA GTTTGGTCGT
ATCGACATTC TGATCAATAA CGCGGCCTTT CAAATGGCGC ACGACAGCCT CGATGATATC
GACGATGACG AATGGGTAAT GACATTCGAC GTCAACATCA CGGCCATATT CCGCATTTGC
CAGCGGGCGC TGCCATTGAT GCCCAAAGGC AGTTCGATCA TCAACACCAG CTCGGTCAAT
TCTGATGACC CATCGCCCAA ACTGCTGGCC TATGCCACTA CCAAGGGTGC CATCGCCAAC
TTCACCGCCG GGCTGGCCCA ATTGCTGGGA GACAAAGGGA TTCGGGTCAA CAGTGTGGCA
CCAGGCCCGA TCTGGACTCC ACTGATCCCT GCCACCATGC CCGATGAGGC AGTAAAGAAC
TTCGGGTCGA GCTATCCGAT GGGCCGGCCG GGCCAACCGG TTGAGGTAGC TCCGATCTAC
GTCTTGCTCG GCTCCGATGA GGCCAGCTAC ATCTCTGGCT CGCGCTATGC CGTTACGGGC
GGCAAACCCA TTCTTTGA
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| Protein sequence | MRDYPTPPFP SQPQSVPGSQ RKMEPTPDCG EHTYTGNGRL NGKVALITGA DSGIGRAVAI
AYAREGADIA LAYLDEHEDA QETAGWVHAA GRQCLLLPGD LARKQHCYDI VDKTVEQFGR
IDILINNAAF QMAHDSLDDI DDDEWVMTFD VNITAIFRIC QRALPLMPKG SSIINTSSVN
SDDPSPKLLA YATTKGAIAN FTAGLAQLLG DKGIRVNSVA PGPIWTPLIP ATMPDEAVKN
FGSSYPMGRP GQPVEVAPIY VLLGSDEASY ISGSRYAVTG GKPIL
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