Gene PputW619_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2857 
Symbol 
ID6111808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp3160007 
End bp3161554 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content58% 
IMG OID641622644 
Productsignal transduction histidine kinase 
Protein accessionYP_001749718 
Protein GI170722030 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.207944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.114386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC TGCCCCCTGA TGAGACCATT CGTGCCGCAC TCAGGAAATC CCAAGCCCGG 
CTGCACAGGC AGCACGAGCT GGTGGTCGAG TACGCGGTCA TGTCGCTTAA ATCCACCAAC
CTGGATGACG TCCTCGATCA GGCTTGCGCG CTGGTGGCCC AAGGCATGCG CACCCGATTC
GCCAAGGTCC TCATGCCGAT TCCCGATAGC GACAGGTTTC TGCTGTCGCA TGGCGTGGGG
TGGGACGAGT CCGATATCGG CCATGCGACA GTGGGGGCCG ATGAGGCCAG CCCTGCCGGG
TTTGCCATTC AAACCTATCG GCCTGTGATT TCGAATCACC TGGGCCAGGA ACAGCGCTTC
AGAACACCAG AGTTACTGAA AAAGTATGGT ATTGAGCGTG CCATCAACGT ACCTATCAGG
GGCGCATTGG TGCCGTTTGG GGTACTTGAG GCAGACAGTA GCGATGGTGA GGACTTCATC
GAAAGTGATC TGGTGTTCCT GGAAGGGATA TCCAACGTTA TCTCCATGGC GGTTGAGCGG
TTGGCCGCTG GTGATGATGC TCAGCTGGCC GACCCCTATT CGGAAAGCAT GCTCAACGCC
AGCCCGGATT GTGTGTACGT GTTGTCCCGC AGCGGTCACA TCGAGTTCAT GAACGAGGCC
GGGCTGGCGT TGATGCACAT CGCCGACTTG GCCGAGGTCA AAGGGCTGCC ATGGTTGCAG
TTTTGGCCTG CCGAGTCGGG CCCGGTCGCC CGGGAGGCTC TGGAAAAAGT CGCCAGAGGC
GAGTCGACCC GCTTTGAGGG GTTCTGCCCT ACCGGTCAGC AGGCGCCTAA ATGGTGGGAT
GTCTCCGTTG CCCCCGTGTT GAGCGCCGAT GGGCAGGTCG AAAAACTCAT TGCAGTATCC
AGAGACATCA CCGAACGGCA CCATTACGAG GCTCAGTTGC TGTCGCTGAT CGATGCACAG
AACTCCAGGC TCAACAAGAA CGACCTGCAT CTCGAAGAGA TTCATCACCG CGTCAAGAAC
AGCTTGCATC TGGTGAACAC CCTGTTGCTC TTGCAGGCGA ACCTGACGCC GGATGCCGGA
GTCAAGCTGC AACTGGAAAC GGCAGCGGGT CGGGTTGTGA CCATTGCCAG CGTGCATGAA
CGGCTCTATC AGACGGCCGA TCAAGAGGTG CTTGCCTGCG ACTACCTCGG TGCCTTGCTC
GGTGACCTGG GTAGGGCACT GGCCGACCGG AAGATCGTCC TGGACGCTGA CGCGTTCACC
CTGCTGCCAG CAAGAATGGC GCCGTTGGGC CTGGTCATTT CTGAGCTGAT CACCAATGCC
TTGAAATACG GCAAAGGCAC CATCGAGGTC AGCGTGCGGG ATGCAGGTGA CCACGCGTTG
ATCACCGTCA CCGACGAGGG TGACGGTTTT CCCGCGAACT ATCCCAAACC CAGCGGAACT
GGCCTTGGCA TGCGGCTTGT CAGAAGTTAT TCAGGCTATG GAAGCTCAGC GATCTCGATT
GATGGGGGCA CAGATAAAAG CACCATTCAC GTTCGCTTTA AACTCTGA
 
Protein sequence
MQQLPPDETI RAALRKSQAR LHRQHELVVE YAVMSLKSTN LDDVLDQACA LVAQGMRTRF 
AKVLMPIPDS DRFLLSHGVG WDESDIGHAT VGADEASPAG FAIQTYRPVI SNHLGQEQRF
RTPELLKKYG IERAINVPIR GALVPFGVLE ADSSDGEDFI ESDLVFLEGI SNVISMAVER
LAAGDDAQLA DPYSESMLNA SPDCVYVLSR SGHIEFMNEA GLALMHIADL AEVKGLPWLQ
FWPAESGPVA REALEKVARG ESTRFEGFCP TGQQAPKWWD VSVAPVLSAD GQVEKLIAVS
RDITERHHYE AQLLSLIDAQ NSRLNKNDLH LEEIHHRVKN SLHLVNTLLL LQANLTPDAG
VKLQLETAAG RVVTIASVHE RLYQTADQEV LACDYLGALL GDLGRALADR KIVLDADAFT
LLPARMAPLG LVISELITNA LKYGKGTIEV SVRDAGDHAL ITVTDEGDGF PANYPKPSGT
GLGMRLVRSY SGYGSSAISI DGGTDKSTIH VRFKL