Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2857 |
Symbol | |
ID | 6111808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3160007 |
End bp | 3161554 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641622644 |
Product | signal transduction histidine kinase |
Protein accession | YP_001749718 |
Protein GI | 170722030 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.207944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.114386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAC TGCCCCCTGA TGAGACCATT CGTGCCGCAC TCAGGAAATC CCAAGCCCGG CTGCACAGGC AGCACGAGCT GGTGGTCGAG TACGCGGTCA TGTCGCTTAA ATCCACCAAC CTGGATGACG TCCTCGATCA GGCTTGCGCG CTGGTGGCCC AAGGCATGCG CACCCGATTC GCCAAGGTCC TCATGCCGAT TCCCGATAGC GACAGGTTTC TGCTGTCGCA TGGCGTGGGG TGGGACGAGT CCGATATCGG CCATGCGACA GTGGGGGCCG ATGAGGCCAG CCCTGCCGGG TTTGCCATTC AAACCTATCG GCCTGTGATT TCGAATCACC TGGGCCAGGA ACAGCGCTTC AGAACACCAG AGTTACTGAA AAAGTATGGT ATTGAGCGTG CCATCAACGT ACCTATCAGG GGCGCATTGG TGCCGTTTGG GGTACTTGAG GCAGACAGTA GCGATGGTGA GGACTTCATC GAAAGTGATC TGGTGTTCCT GGAAGGGATA TCCAACGTTA TCTCCATGGC GGTTGAGCGG TTGGCCGCTG GTGATGATGC TCAGCTGGCC GACCCCTATT CGGAAAGCAT GCTCAACGCC AGCCCGGATT GTGTGTACGT GTTGTCCCGC AGCGGTCACA TCGAGTTCAT GAACGAGGCC GGGCTGGCGT TGATGCACAT CGCCGACTTG GCCGAGGTCA AAGGGCTGCC ATGGTTGCAG TTTTGGCCTG CCGAGTCGGG CCCGGTCGCC CGGGAGGCTC TGGAAAAAGT CGCCAGAGGC GAGTCGACCC GCTTTGAGGG GTTCTGCCCT ACCGGTCAGC AGGCGCCTAA ATGGTGGGAT GTCTCCGTTG CCCCCGTGTT GAGCGCCGAT GGGCAGGTCG AAAAACTCAT TGCAGTATCC AGAGACATCA CCGAACGGCA CCATTACGAG GCTCAGTTGC TGTCGCTGAT CGATGCACAG AACTCCAGGC TCAACAAGAA CGACCTGCAT CTCGAAGAGA TTCATCACCG CGTCAAGAAC AGCTTGCATC TGGTGAACAC CCTGTTGCTC TTGCAGGCGA ACCTGACGCC GGATGCCGGA GTCAAGCTGC AACTGGAAAC GGCAGCGGGT CGGGTTGTGA CCATTGCCAG CGTGCATGAA CGGCTCTATC AGACGGCCGA TCAAGAGGTG CTTGCCTGCG ACTACCTCGG TGCCTTGCTC GGTGACCTGG GTAGGGCACT GGCCGACCGG AAGATCGTCC TGGACGCTGA CGCGTTCACC CTGCTGCCAG CAAGAATGGC GCCGTTGGGC CTGGTCATTT CTGAGCTGAT CACCAATGCC TTGAAATACG GCAAAGGCAC CATCGAGGTC AGCGTGCGGG ATGCAGGTGA CCACGCGTTG ATCACCGTCA CCGACGAGGG TGACGGTTTT CCCGCGAACT ATCCCAAACC CAGCGGAACT GGCCTTGGCA TGCGGCTTGT CAGAAGTTAT TCAGGCTATG GAAGCTCAGC GATCTCGATT GATGGGGGCA CAGATAAAAG CACCATTCAC GTTCGCTTTA AACTCTGA
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Protein sequence | MQQLPPDETI RAALRKSQAR LHRQHELVVE YAVMSLKSTN LDDVLDQACA LVAQGMRTRF AKVLMPIPDS DRFLLSHGVG WDESDIGHAT VGADEASPAG FAIQTYRPVI SNHLGQEQRF RTPELLKKYG IERAINVPIR GALVPFGVLE ADSSDGEDFI ESDLVFLEGI SNVISMAVER LAAGDDAQLA DPYSESMLNA SPDCVYVLSR SGHIEFMNEA GLALMHIADL AEVKGLPWLQ FWPAESGPVA REALEKVARG ESTRFEGFCP TGQQAPKWWD VSVAPVLSAD GQVEKLIAVS RDITERHHYE AQLLSLIDAQ NSRLNKNDLH LEEIHHRVKN SLHLVNTLLL LQANLTPDAG VKLQLETAAG RVVTIASVHE RLYQTADQEV LACDYLGALL GDLGRALADR KIVLDADAFT LLPARMAPLG LVISELITNA LKYGKGTIEV SVRDAGDHAL ITVTDEGDGF PANYPKPSGT GLGMRLVRSY SGYGSSAISI DGGTDKSTIH VRFKL
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