| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2506 |
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| Symbol | |
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| ID | 6111459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2786719 |
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| End bp | 2787789 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641622301 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001749375 |
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| Protein GI | 170721687 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.166907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.89718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA CGTACTGGCG ATCAGCCCCT GGTCTGATCG ATCAAGCCAG AGCCGAGCCG
CACCGATTCG AATTCTTTCA ATTGGTGCGT CTGCTTCGCC TGCACTACAG CCGCACCGGG
CGCATGGACC TGGCAACCCG GCCGCACGAA GACCCGCTGC GTTTCCGCAC TCAGCTGTCG
CTGGCGTTTC CGGCCAGCGA GGTCAGCGAC CTGCAGTTCG AGCGTGAGGG CAAGGTGTCG
ACGGCCGGCC TGCCGCTGTC GGAAGTCCAG GTCACTTTCA TGGGCCTGGT AGGCCCGTCG
GGCGTATTGC CTCGCCCGTA CACCGAGCTG CTGCTCGAGC GCCACGTGCA GTACCGCGAC
GATGCCGCCC ATGCGTTTCT CGACATCTTC TCGCACCGCA TGACCACGCT GTTCTACGAA
GCCTGGCAAA AGTACAAATT CCATATCGAG CACGAGCGCA ACGGCACCTC GGGCTTCGAT
GGCTACCTGC TCAACCTGGT CGGCCTGGGC CCGCGCGCCC AGCAGCTGAA GTTCGAACGC
CAGCAACCGG TGCTGCGCCG CGAGCTGTTC AGCTACTTTG CCGGGCTGCT CAGCCAGAAG
CCACGCAACG CGCTGAACCT GGAGCGGATG CTCGGCTTCT ATTTCTCCCT GCCGATCAAG
GTCAGGCAGT TCGCCGGCCG TTGGTTGAAC CTGCAGCCCG AACAGTGCAC CCAGCTTGGC
CGCAAGAACG CCCAGCTCGG CATCAGCGCC GTGGCCGGCA ACCGCGTGTG GGACTACCAG
TCGTGCATCC GTATCGAGCT CGGCCCCTTG GCGTTGGCCG ATTACCGGCG GTTCCAGCCT
GGCACCGACG ACTACCGCAA GCTGGTCGAG CTGGTGCGCT TCTATGTAGG CGCCGAGCTT
GATTTCGAAA TCGCCCCGCT GCTCAGACGC GAAGCCGTGC CCCGTGCCCA ACTGGGCCGC
AGCGGCAATG TCGCGCTGGG CTGGCTGGGC TGGCTCAAAC GCCCTGGCCG TGACGCGGAG
CCTTCGCGTT GCGCCGTCTT CCACATTCCT TACGATGGGG TCGCCTTGTG A
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| Protein sequence | MASTYWRSAP GLIDQARAEP HRFEFFQLVR LLRLHYSRTG RMDLATRPHE DPLRFRTQLS
LAFPASEVSD LQFEREGKVS TAGLPLSEVQ VTFMGLVGPS GVLPRPYTEL LLERHVQYRD
DAAHAFLDIF SHRMTTLFYE AWQKYKFHIE HERNGTSGFD GYLLNLVGLG PRAQQLKFER
QQPVLRRELF SYFAGLLSQK PRNALNLERM LGFYFSLPIK VRQFAGRWLN LQPEQCTQLG
RKNAQLGISA VAGNRVWDYQ SCIRIELGPL ALADYRRFQP GTDDYRKLVE LVRFYVGAEL
DFEIAPLLRR EAVPRAQLGR SGNVALGWLG WLKRPGRDAE PSRCAVFHIP YDGVAL
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