Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2445 |
Symbol | |
ID | 6111398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2716176 |
End bp | 2717231 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641622240 |
Product | TPR repeat-containing protein |
Protein accession | YP_001749314 |
Protein GI | 170721626 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0758357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACAC GCCACCGCTA CCTGATCGCT GTGTTACTGC TGATTCTGGT ATCAGTCGGC ATCGTCTACC TGCGCCGGGA TACCCCGCCA GCACAACCGA CACTTCCCCC GCACAGCTAC GCCAAAGCCC TGCGCCAGGC TCATGAAGGC CAACCGGGCG CCGCGCGGGT GCTCTACCAG CAACTGCAAC GCAACGACCT GGCGCCGATC CGCCGCGCAG CCTTGTACGC AGAGCTGCCT AACTACCCTT CACCACAAGC GCTGAAACTG GCCCGCATGG ACCTGGAAAA CGATGAACCC TTGGTCCGTC GTGCAGCGAT CGCCAGCATC CGCCGCCTGC TGCCTGCGGC ACAGCGCAGC CTGGTTCTTG GCCCCCTGCT GGATGATGCC GAGCAAAGTG TACGCTTCGC CGCCGTCGAT GCCTTGCTTG GCCTGGACCC CGACGCCATT GGTCTGTACT TCGGCCCACT GCAGGCCGCA CTGGAGCAAT ACCAGCAAAC GCTGGAACAA CAGCCCCAGG ATGCCGCGGC CCAGGTACAC CTGGCACGCC TGTATCTGCA TGAGAATGAG TACACAGAGG CTGCATCCGC CCTGCAACGT AGCCTCGCGT CAAACCCGGA CAACCTCGAC GCCCTGGCGA CCCAGGTACG CTTGCTCGAA CGTCAAGGCC ACCACGACCA GTCCCGGCAG GTACTGGCAC AGGCACTGGC GCTGCGCCCG GATTCGGCCT TCCTGCAACA CGAACTGGGG CGCTGGCTGA TCCGCCATGG CCAGCGCGAA TTCGCCCTGC TCGCTTTGTC CCGCGCAGTC GAGCTGGAGC CGGACAATGC CGACTATCGC TATAGCCTGG CAGTGACCCT GCACGACCTG GAACAGTCCG ATGCAGCGCA AAAGCAGCTC GAAACCCTGC TCAGCCGGCA ACCGGCAAAT CGCCGGGCGC GGGTGTTGCT GATTCAATAC TGGAAAGAAA CAGGCCAGTT GCAGAACGTT CAGGTGCTGC TTGCCGAACT GGAGCGGCAA AACCCTGACG ATCCGTTTCT GCAGCAGGGG CTTTAG
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Protein sequence | MPTRHRYLIA VLLLILVSVG IVYLRRDTPP AQPTLPPHSY AKALRQAHEG QPGAARVLYQ QLQRNDLAPI RRAALYAELP NYPSPQALKL ARMDLENDEP LVRRAAIASI RRLLPAAQRS LVLGPLLDDA EQSVRFAAVD ALLGLDPDAI GLYFGPLQAA LEQYQQTLEQ QPQDAAAQVH LARLYLHENE YTEAASALQR SLASNPDNLD ALATQVRLLE RQGHHDQSRQ VLAQALALRP DSAFLQHELG RWLIRHGQRE FALLALSRAV ELEPDNADYR YSLAVTLHDL EQSDAAQKQL ETLLSRQPAN RRARVLLIQY WKETGQLQNV QVLLAELERQ NPDDPFLQQG L
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