| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2425 |
|---|
| Symbol | |
|---|
| ID | 6111378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2692766 |
|---|
| End bp | 2693383 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641622220 |
|---|
| Product | LexA repressor |
|---|
| Protein accession | YP_001749294 |
|---|
| Protein GI | 170721606 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCTCCA TGGACAATCT CACCCCCAAA CGCCGCGCAA TCCTCGACTT CATCCGTGAA
CGCATCACCG ATCACGGCCA ACCGCCGAGC CTTGCCGACA TCGCCATCCG CTTCGGCTTT
GCATCACGCA GCGTTGCGCG CAAGCACATC ACTGCCCTGT GCCAGGCTGG GTACATCGAC
GTCACGCCCA ACCAGGCACG GGGCATCCGC CTGGCCGCAC CCTTGCGCCG CCCGGAAATT
CTCGAAGTGC CCGTGCTGGG CCAGGTGGCT GCAGGCGCGC CGATTGGCCC CGACCTTGGC
ATTCACGAGC AGTTGCTGAT TGACCCCAGC CTGTTCCGAC GCACACCGGA CTACCTGCTC
AAGGTGCGCG GCGACTCCAT GATCAATGAC GGTATCTTCG ACGGTGACCT GGTGGGTATC
CGCCAGCAAG GCGAGGCCCG TGATGGCCAG ATCGTGGTCG CCCGTCTCGA CGGTGAGGTC
ACCATCAAAC GCCTGCAACG CCAACCGGGC GGCTACCGGT TGCTGCCACG CAACCCTGCC
TATGCGCCGA TCGATGTCGG GCCTGAACGC GAGTTCTTCA TCGAAGGCGT GTTCTGCGGC
CTGTTGAGGC GCGACTGA
|
|---|
| Protein sequence | MCSMDNLTPK RRAILDFIRE RITDHGQPPS LADIAIRFGF ASRSVARKHI TALCQAGYID
VTPNQARGIR LAAPLRRPEI LEVPVLGQVA AGAPIGPDLG IHEQLLIDPS LFRRTPDYLL
KVRGDSMIND GIFDGDLVGI RQQGEARDGQ IVVARLDGEV TIKRLQRQPG GYRLLPRNPA
YAPIDVGPER EFFIEGVFCG LLRRD
|
|---|
| |