| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2422 |
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| Symbol | |
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| ID | 6111375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2689453 |
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| End bp | 2691051 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641622217 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001749291 |
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| Protein GI | 170721603 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.257185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC GCTTGCCCAT GTTCCACCTA CGAACCCTGG TTGTCGGCAT TGTCGTGCTG
GCGTGCCTGG CAACCCTGTG CAACACCCTC GCTGTCGCCT ACCGGGTACA GCACCACGCC
TTGGTAGACC TTGAGCTGAA GGCCAACCAA GCCTATGCGA GCAAACTGGC ATCGGATATC
AACGAGTTCC TGCGCTCGGC ACGCAACCAC CTGTCCTACG CCGCCCGGCA ACTGGACGGT
GGCCTGGACG ACATGACCAT GCTGAAAAGG GAAGCCAAGC GACTGCAGGT GCAGGACAAG
GACTTCAACT CCATCGTCAT CGTCAACGCC CAAGGCCAGG TGCTGGTGGC TCATCCGAAC
ACAGAGCAGA TCACCAGCCA CCACCAGCAC TCCAGCGAAA TCCGCCAAGC CGTGCAAGCC
CGTCAGCCGT GGGTCAGTTC CGCCTACACC TCGCGCGGGG GCGAGCTGGT GATATTCGTT
TCGCAGCCGA TCTTTGCCGC CGATGGCCGT TACCTGGGCA TTGTCGGCGG TTCGGTGTTT
CTCAAAAAAG AAAGCGCACT GCATACGTTG ATTGGCCTTC ACTACCAACA GGACGGTACC
TTCGCTTTCG TCGCCGACGG CAATGGACGC CTGCTGCACC ACCCCGACCA TGCGCGCATT
GGCACCCAGG TCAGCAGCAG CCCGACGATC AGCGCGGCCT TGCGTGGCGA GGCAGGCACC
CTTGAAGTGC CCAACTATAT TGGCGTTCCC ATGCTCGCAG GCTTTGCCCC GGTGCCTGAA
GCGCACTGGG CAGTGGTGGT CCAGACACCG CGGGATCTGG CCTTGGCACC ACTGGGCGAA
ATGACCCGCA AGGTGCTGCT TTATATACTG CCGGTCAGCA TTATCGGCTT GCTGTTGATG
CTATGGATGA CCTACCGCCT GACCTTGCCG TTACGCCAAC TGGCGCACAG CGCCAGTCAC
CTGTCCGCCA CCCAGACCGG CGAACAGCTG CGCCGTATCG ACGCGTGGTA CGTAGAGGTC
GCAGCCATCC GCCGCGCCTT GCTGACAGGC GAGCAATTGC TGCAAGAAAA ATTCGGCAAG
CTGCGCCAGC AGGCTCAGAG TGATGCCCTC ACCGGCCTTG CCAACCGGCG TGCCATGCAA
CTGGCGCTGG ACGCCTTGAT GCAAAGCTCA AGAGCATTCG CCGTGCTGGC CCTGGACATC
GACCACTTCA AACGGGTCAA CGATACCTTT GGCCACGATG CTGGCGACGA GGTGCTCAAA
CACCTCGCCG AGCTGCTGCG TCACAATTCA CGCCAGGATG ACCTGCCCTG CCGGGTCGGT
GGCGAGGAGT TCACCATGCT GCTGCCCGAC ACTGGCCTGG CCGATGCCCG GCGCATTGCC
GAACGGATAC GCAGCGCGGT CGAACAGGCC GATTCACCCC ATGTGGGCAA GCTTACCGTG
TCGATTGGCG TAGCCTGCCG CCGGCCCGAT ACACAACAGG CCGGCAGCGT GCTCAAGCAA
GCCGACGAGC AGCTGTACAA GGCTAAACAC AACGGCCGCA ACCGGGTCGA AGTGCTTGAC
CTCAGCCCCT CACCCCCAGC ATTCCCCGCT CGACGATGA
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| Protein sequence | MLKRLPMFHL RTLVVGIVVL ACLATLCNTL AVAYRVQHHA LVDLELKANQ AYASKLASDI
NEFLRSARNH LSYAARQLDG GLDDMTMLKR EAKRLQVQDK DFNSIVIVNA QGQVLVAHPN
TEQITSHHQH SSEIRQAVQA RQPWVSSAYT SRGGELVIFV SQPIFAADGR YLGIVGGSVF
LKKESALHTL IGLHYQQDGT FAFVADGNGR LLHHPDHARI GTQVSSSPTI SAALRGEAGT
LEVPNYIGVP MLAGFAPVPE AHWAVVVQTP RDLALAPLGE MTRKVLLYIL PVSIIGLLLM
LWMTYRLTLP LRQLAHSASH LSATQTGEQL RRIDAWYVEV AAIRRALLTG EQLLQEKFGK
LRQQAQSDAL TGLANRRAMQ LALDALMQSS RAFAVLALDI DHFKRVNDTF GHDAGDEVLK
HLAELLRHNS RQDDLPCRVG GEEFTMLLPD TGLADARRIA ERIRSAVEQA DSPHVGKLTV
SIGVACRRPD TQQAGSVLKQ ADEQLYKAKH NGRNRVEVLD LSPSPPAFPA RR
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