Gene PputW619_2372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_2372 
Symbol 
ID6111325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2642531 
End bp2643595 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID641622167 
Productmembrane protein AbrB duplication 
Protein accessionYP_001749241 
Protein GI170721553 
COG category[R] General function prediction only 
COG ID[COG3180] Putative ammonia monooxygenase 
TIGRFAM ID[TIGR03082] membrane protein AbrB duplication 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACTG CCCTCTCAGG CTCTTCCAGA ACCCCCATCC TGTGGCTAGC CCTGCTGACC 
TGCGCCGGAG CCTCCGGCCA GCTGCTGCAT GCCATGGCTG TACCGGCCGG CTTGTTCCTC
GGCCCCATGC TGGTAGCCAT TGCGTTTGGC GTATCCGGAG CACGCTTGAG CATGCACCGC
CAGGTATTCC GGTTCGGCCA AGGCTGTGTT GGCCTGCTGG TTGCGCACTC GGTGACCTGG
GCTGTAATGG TCTCAATGGC GCAGTCCTGG CACCTGATGC TGCTGGCCAC CTTCATTACC
GTTGCCCTGA GCGCCCTGGT CGGGCTCGGT ACCGTGCGCT TCGGTGGCAT ACCTGGCAGC
ACGGCTGCGT GGGGTACCGC GCCGGGCGCG GCCTCGGCCA TGGTATCGAT GGCCGAGGAA
AACGGCGCTG ACGCCCGGGT GGTGGCGACC ATGCAGTATG TGCGGGTGGT GTGCGTGGTG
ATGATCGGTG CACTGGTCAG CCACCTGCTG GGCGCTACGC AGGGCAACGG CGCCGCGGCC
AGTTCACCGG CGGTGCTGCA AAGCCCGCAC CTGTTCGACG CGGTGCTCAG CGTTGGCGTG
GTGCTGATCG GTGTGCTGGT GGGTAGCCGC ATGCCGGCCG GCGCCCTGCT GATGCCGCTT
TTGCTCGGCG GTGCGCTGCA ACTGAGCGGC GTGCTGACGA TCACCCTGCC CGAACCACTG
CTGGCCTTCG CCTACGGCGC CATCGGTTGC TACATAGGCC TGCGCTTTGA CCGGCAGACC
GTGCGCTATG TCTGGAAGCG CTTGCCGACG ATGATCGCCG GCGCCATGGC CTTGATCATC
CTGTGTGCCG CCTGTGCCTG GGTACTGGCA ATCGCCATGG ACACCGACTT TTTGTCGATG
TACCTGGCCA CCAGCCCCGG CGGGCTGGAT GCCATGGCGA TTATCGCAGT CGAAACCCAC
GCCGATGTCG GGCTGGTGCT GGCGATGCAG ACCTTGCGCC TGTTTGGCGT GATTATTACC
GGCGCCTTCT GTGCACGGCA GATCATTCGG TTGACACAGG CATGA
 
Protein sequence
MQTALSGSSR TPILWLALLT CAGASGQLLH AMAVPAGLFL GPMLVAIAFG VSGARLSMHR 
QVFRFGQGCV GLLVAHSVTW AVMVSMAQSW HLMLLATFIT VALSALVGLG TVRFGGIPGS
TAAWGTAPGA ASAMVSMAEE NGADARVVAT MQYVRVVCVV MIGALVSHLL GATQGNGAAA
SSPAVLQSPH LFDAVLSVGV VLIGVLVGSR MPAGALLMPL LLGGALQLSG VLTITLPEPL
LAFAYGAIGC YIGLRFDRQT VRYVWKRLPT MIAGAMALII LCAACAWVLA IAMDTDFLSM
YLATSPGGLD AMAIIAVETH ADVGLVLAMQ TLRLFGVIIT GAFCARQIIR LTQA