| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2283 |
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| Symbol | |
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| ID | 6111236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2547707 |
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| End bp | 2551369 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641622078 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001749152 |
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| Protein GI | 170721464 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000268234 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGATT TTGAGGAAAA ACGACTAAAT CTTGCGGAGC AAGTACGCCT CGGTATAGCG
AGCGAAAACC GTCTCCACCC TGAGCATGCT CGGGCTTTCG TTCGTGGGTT ACAAACGACT
TGGCGTGTAC CGCCCATTCA GTGGCATGAG GGCGAGTCGG AAAAGCTAAT CCATGACGCA
AATAGGCTGA TACACGCCGC CGAGATTTGT CGCGAACTGG ATGGACCAGA ATCAGAATCT
GCCAAAGATT GCTTTCGTAG AGCCGCTGAA CTACTTGAAT GGCTCACACG GATGCAGGAG
GAGCCTTCAA GCTTTGCTCC TGCAGGGCTG CTGGCTGCTG CGGCATTTCA GCTCGGGGGG
CTGCCAGCGA TGGCAACGGC CCTTTTAGGG CAGTTGGAGA TTGCTGATGA TGGCACTCGG
TTACTTTCGA AGTTTCTTAG CGGAGATTTT AATGGGGTTG TTGAGGGGGC TTTAGCTTTC
TGGCGGCAGA ATCCCCACTT GACAGAGCGT GAATCTTCTA TGCGGTTGTT AGCGGATAGG
GAACCAGCGG AAGCAGAGGC GTCAGGAGAA CTTGGGACCT CCCGCGAAGC TGGAAGCCTT
GAATGGTACT TTGTTGTGGA GCTGGTGCGC AGTTTGGGTG TCATAGCATC CTCGCTGATG
CAAGGCGACA GCGGTCGCAC GCAGCAGGGC CTTCGAAAGT TAAAGGCGCT CGACAAAATG
GCTACCCGAG CATATGGCGA TGAGCTCTCT ATGCTCATTT CGCTATTGGC AACCGTCGCC
GAAAGCTACA GCTCTTCGAG CATTTATGGC CCAATTTTGC AGCTGGCCGA GATTAAGCCG
GAGCGAGTGG ATCGCCTGCG CAGATTTGCT CGTGACCAGT TCGGACGGGG GCGCGGCATC
CTGTGGCCTT CCCAGATCCG CGGATTGGAG CGTTTGCTCA ATTCTGCCTC GTTCGCCCTC
TGTACTCCGA CAGGCTCAGG GAAGACGTTG GTGGCCAACC TTGCGCTGGT TAAAGAACTG
ATGCTTGCGC CGGACGATCA GTCTGGGCCG CTTGCCCTCT ATCTGGTGCC TTCCAGAGCT
CTAGCGGGAG AGGTGGAAGC CAAGCTAGTC AGTGAGCTGG GTAGTGATCT TGTTGTTACA
GGTCTTTATG GTGGTTCCGA TTGGGGGATT ACTGATTACT GGTTGAGGGC CGACAAGCCA
ACAGTCCTGA TCGCCACAGT CGAGAAGGCT GACGCCATAA TGCGCTATGT CGGCCCATTG
ATCGTTGCTC GCCTGCGGCT TCTGATTGTT GATGAGGCAC ATCAGGTCGT AGTCGCTGAT
CGCGATAGAG CAGAGGTGGA CTTCGCGGAA CATAGCAGTC GCACGTTGCG TCTAGAGAGT
TTTGTTTCGC GACTGTTAGC TCGAGCGCCG AAAATTGCGC GCGTTGCTCT GACTGCTGTC
GCCGGCGGGG CAGCAACGCC TGTCGCCTGT TGGGTTGAAG GAGTAAGGGA AGCTGAGCCT
ATTGGCGCAA ACTACAGAAG TACGCGACAA CTCATAGGAA CGCTCGCTGC AACTTCGGGC
GAAGCGGGGC AGATGAGCTT CGACTTGCTG AACGGGGCAG AACTCCAGGT TCGAGGTCGA
GATGAGTCAG TTTACATTCC ACTGCGCATA GCCCCGATGC CGCAGTTGCC AGCGACGATG
CGTAACAGCA TCGCTCGCTA TAACGAAGTG AATGTCTTGT GGACCGCAAT GCATTTGGTG
GAGGGAGATC GTCGCGTCTT GATTTCCATA GCCCAGCAGC CTGAACTGAC AATGAAGTGG
TTTAAGGAAG CACTTGAGTT ACCTCAATGG CGTGATGCCT GTCGATTCTC GGGCCCGACA
GACCCTGAAG CAATCCTTCT ATTTAAAGCA GCCAGAGCAA GCTGCGTGGA TTACTGTGGC
AAAACATCCT ATGAGGTCTC ATTGCTGGAT CATGGCATTG CTACAAGCCA CGGTCAGATG
CCTCAGCGCC TTCGAAGACT GATGACGGCC CTTATCGATC GCAGGATCTG TACGATTACA
GTTGCTACTG CAACCCTGAC GGAAGGCGTT AATCTGCCGT TCGATCTTAT TCTAGTTCCA
TCGATAACGC GGCGATCGTT TGACCCGACC AAAAACCAAT CCAAAGTTAA CCCCTTATCT
GCGGCAGAAT TTAGAAATCT CGCCGGCCGC GCCGGCCGAC CAGGAGCATC TCAAGGTCAG
GAGGGTATAA CGCTTGTGGC GCTACCCACC AAGCCGTCAA CGACAGCATC AGGGCAGATC
CGAACTCAGC TGGGGCAGAT AAAGGAGTTG CGAAAGCACT ATAATGATTT GCTGGATAGA
CTCCGCTCAG AAGAGAAGGA GCGCAATGAG GTGCTGAGTC CTCTGACGTT GTTACTGGAG
GCGATTCGGG AAAAAGCGCA AACTTTGCTT GGAGTTGATG AGGAGTACTT CCTGGACTGG
CTCGAAGAGA CGGCGCCTGA CGATATCAGC GTAAAGGCTG GTTTAGTTGA TGCTGATGAT
GAGTCTAGGC TTGCGGATTC TCTAGATGAG CTTGATGGCG TATTGCTGAC GGCTATAGAA
GAGCTGGCAA CAGTTGGGGC GCGGGTGGAC TCTCCTGCCA AGACAGAAGC TTTGCTTAAA
AAAGTATGGA AGTACACGTT CAGCAAGGTT GTGAGCGCTG AAGAAGCTTG GCTAGAGCGG
GCATTCGTAC GACGTGGGCA AGGTATTGTT GGCACGCTAT ATAGCGATAC CGATGAAAGG
CGACGTCTAT ATCAGTATGG CTTCACTCCG TACGTGGGTC GAAGGTTTGA ACGCATTGCG
CCGAAAATTA GTGAGATACT GAAGATGGCG CAGGGCTATG GCTCCTCCGG TCCAAAGCAG
CGTCTTGATC TCTTTAAGCG CTTGGGGCTT TTAGTATCCA AGGATCCTGG GTTTGGCTTC
CGGGTACGTT CCAGTGTGGC CGATCAAGGA CTACTCAAAA GCTGGAAGTC TCTGCTTGCG
TGGTGGATGT GCGCGCCAGA TGCAAAGGTA CCATCTGCTG AGAACCTACG ATCGTGGCAG
CGTTTTGTAT CGGATAACTT GGAGTTTCGA CTAGGGGTTG CGATAGGCGC CGTAGTAGCG
CGTGCATGGT CCGAGGGTGC CGACGATCCG AGCTCCGTCC CGTCTCTAAA AGAGTGGAAA
GAGATCACGG GACTGCCGTG GTTCGGTTTC TGGGCTAGAG AGATGTTGCG ATGGGGAACA
CTTGAGCCGT TCGTCGCGTT CGCTCTAGCG CAGGGTCTAG CGGGTACGCG CGATGAGGCT
CAGGTTCTTC GACAAGAATT CAAAAACTGG ATGGAGGAAA ATTATACGGA TATCGAGTCG
GAAGACTGGA TTGACCCTCA GTACTTTCTA CAGTGGCAGC AGAGCTTACC GTTGTCCATG
AAAGAGTCCT CTCAGCCTCA GAAACTAGGG GCCCAATTAA CTGGGACCGA CGGCCACAAA
GGCCTTTATA GGGTGTTGCC ATTGCCAAAC CGTGAGGAAA TAATCTGGCT CGATGCCTCT
GGATTTGAAT TGGCTAGGAG TACGACGCGT GAGGACATAG CTGGTATTTC GTATCGCGAT
GATTACGAGC TGAAAGTTTC ACGAGGTATG AGTTACGTGC GTCGAGTTTT CCGAAGCTCC
TGA
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| Protein sequence | MTDFEEKRLN LAEQVRLGIA SENRLHPEHA RAFVRGLQTT WRVPPIQWHE GESEKLIHDA
NRLIHAAEIC RELDGPESES AKDCFRRAAE LLEWLTRMQE EPSSFAPAGL LAAAAFQLGG
LPAMATALLG QLEIADDGTR LLSKFLSGDF NGVVEGALAF WRQNPHLTER ESSMRLLADR
EPAEAEASGE LGTSREAGSL EWYFVVELVR SLGVIASSLM QGDSGRTQQG LRKLKALDKM
ATRAYGDELS MLISLLATVA ESYSSSSIYG PILQLAEIKP ERVDRLRRFA RDQFGRGRGI
LWPSQIRGLE RLLNSASFAL CTPTGSGKTL VANLALVKEL MLAPDDQSGP LALYLVPSRA
LAGEVEAKLV SELGSDLVVT GLYGGSDWGI TDYWLRADKP TVLIATVEKA DAIMRYVGPL
IVARLRLLIV DEAHQVVVAD RDRAEVDFAE HSSRTLRLES FVSRLLARAP KIARVALTAV
AGGAATPVAC WVEGVREAEP IGANYRSTRQ LIGTLAATSG EAGQMSFDLL NGAELQVRGR
DESVYIPLRI APMPQLPATM RNSIARYNEV NVLWTAMHLV EGDRRVLISI AQQPELTMKW
FKEALELPQW RDACRFSGPT DPEAILLFKA ARASCVDYCG KTSYEVSLLD HGIATSHGQM
PQRLRRLMTA LIDRRICTIT VATATLTEGV NLPFDLILVP SITRRSFDPT KNQSKVNPLS
AAEFRNLAGR AGRPGASQGQ EGITLVALPT KPSTTASGQI RTQLGQIKEL RKHYNDLLDR
LRSEEKERNE VLSPLTLLLE AIREKAQTLL GVDEEYFLDW LEETAPDDIS VKAGLVDADD
ESRLADSLDE LDGVLLTAIE ELATVGARVD SPAKTEALLK KVWKYTFSKV VSAEEAWLER
AFVRRGQGIV GTLYSDTDER RRLYQYGFTP YVGRRFERIA PKISEILKMA QGYGSSGPKQ
RLDLFKRLGL LVSKDPGFGF RVRSSVADQG LLKSWKSLLA WWMCAPDAKV PSAENLRSWQ
RFVSDNLEFR LGVAIGAVVA RAWSEGADDP SSVPSLKEWK EITGLPWFGF WAREMLRWGT
LEPFVAFALA QGLAGTRDEA QVLRQEFKNW MEENYTDIES EDWIDPQYFL QWQQSLPLSM
KESSQPQKLG AQLTGTDGHK GLYRVLPLPN REEIIWLDAS GFELARSTTR EDIAGISYRD
DYELKVSRGM SYVRRVFRSS
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