Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2246 |
Symbol | |
ID | 6111199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2498777 |
End bp | 2499427 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641622041 |
Product | nicotinamidase |
Protein accession | YP_001749115 |
Protein GI | 170721427 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.942136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CCAGTTTCGA TGTCGACGCG CAAAACGGCT TCACCGCCAA TGCCCCACAG GAATTGCCGG TGCCCGAAGG CAATGAAATC GCCGCCGATC TCAACACCAT GGCCCTGCGC GCCGACCTGC GCCTGGGCAG CAAGGACGCG CACCCGGCCA ATGCCGCGTG GGTGGTCACA GAACCTGGGC AAATGCTGCA ACCGCTGACG CTGGCCAATG CCGACCTGAC CTGGGTCAGC CACTGCGTGC CGGGCACGCC GGGCTTCGAA CTGCTGCCAG GCCTGCCCGC CCCCATCGAT TACGACTACT TCGTGTGGAA AGGCGTCGAA CCCGACCTGC ACCCCTACGG TGCCTGCTAC CACGACCTGG CCGAGCGCCG CTCCACGGGC GTCATCGAAT ACCTCAAGGT GCAGCAGGTG GGCGCGGTGA TCGTCGGTGG CCTGGCCCTG GACTACTGCG TCAAAACCAC CGCCCGGCAG TTGCGCCAGG CGGGCTTCCA GGTACTCCTT TACTTGCCTG CCTGCCGCGC CCTGACCCAG GAAGGCGCCA TCGCAGCGTG CGGCGCACTG GCCGCCGAGG GCGTCATCCT CTGCGGCGAC GAGGCCGCGC TCGACCACCA GCTCTCTCTG ATCAAGGAAG ACCGCCCATG A
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Protein sequence | MKIASFDVDA QNGFTANAPQ ELPVPEGNEI AADLNTMALR ADLRLGSKDA HPANAAWVVT EPGQMLQPLT LANADLTWVS HCVPGTPGFE LLPGLPAPID YDYFVWKGVE PDLHPYGACY HDLAERRSTG VIEYLKVQQV GAVIVGGLAL DYCVKTTARQ LRQAGFQVLL YLPACRALTQ EGAIAACGAL AAEGVILCGD EAALDHQLSL IKEDRP
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