| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2192 |
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| Symbol | |
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| ID | 6111145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2439986 |
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| End bp | 2440570 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621987 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001749061 |
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| Protein GI | 170721373 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.783463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGAA CTAACTCTCA GGACCACCTC GGCGCACGCG AGGCGCAGTT GCAGGCCTTG
CTGCTGCGCG GGCTGGCGGG CGATGCACGG GCCTACCGCG AATTCCTTGC GGCGCTGGCG
CTGCATGTGC GTGGGTTTCT GCGGCGGCGC CTGCAGCAGC GCCCGGCCGA AATCGAAGAC
TTGCTGCAGG AAGTGTTGCT GGCCGTGCAT AACGCACGTC ATACCTACCA GCCGCAACAG
CCGCTGACGG CGTGGGTACA GGCGATTGCC CGTTACAAGC TGGCAGATTA CCTGCGCCGC
TATGCGCACC AAGACGCGTT GCACGAGGTG CTGGAAGACG ACAGTGACCT GTTCGCCACC
AGTGATGAAG CGCCTGCCCA GGCCAATCGC GACCTGGGCA AGCTGCTGGG GCGGTTGCCG
GCGCGCCAGC GTTTGCCCAT CGTCCACGTC AAGCTCGAAG GGCTGTCGGT GGAGGAGACT
GCGCGTATCA CCGGGCTTTC CTGTTCGGCG GTCAAGGTGG GGATACACCG GGGGCTCAAG
GCGCTGGCCA AGCTGATTCG AGGCAGTGAA GAGCATGAAG ACTGA
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| Protein sequence | MQRTNSQDHL GAREAQLQAL LLRGLAGDAR AYREFLAALA LHVRGFLRRR LQQRPAEIED
LLQEVLLAVH NARHTYQPQQ PLTAWVQAIA RYKLADYLRR YAHQDALHEV LEDDSDLFAT
SDEAPAQANR DLGKLLGRLP ARQRLPIVHV KLEGLSVEET ARITGLSCSA VKVGIHRGLK
ALAKLIRGSE EHED
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