| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2182 |
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| Symbol | |
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| ID | 6111135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2428876 |
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| End bp | 2430075 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641621977 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001749051 |
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| Protein GI | 170721363 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACCT TTTCCTACAC CGCGCTCGAC AGCGAGGGCC GCAAGCAGCA AGGCGAACTG
GACGCCAGTG ACCGTGACCA CGCCGCTCGC CAGTTGCAAC GGCGCGGCCT GCTGATTCTG
CAGCTCAGGC AGGGTAGCCG CCTGCTGCGT TCGGGCAAGG CGCGCAGCAT GTTCCAGCCG
GTGGAACTGA TCACCATCAC ACAGCAGCTC ACTACCCTGC TCAGCGCCGG GCAACCGCTG
GACCGGGCGC TGGGCACCGT GCTGAAGAAC GTGCGCAGGC CCGCCGCCAA GGCCGTGCTG
GAGCGGGTGC GCGAGCAGGT CAAAGCCGGC TTGCCGCTGT CCCAGGCGCT TGAGGAACAC
CCGGGCAGTT TCTCACCGTT CTACACCAGC CTGGTGCGGG CCGGCGAAGC CGGCGGTGTA
CTCGAAGTGA CCCTGGCCCA GCTTGCCGGC TACCTGGAAC AAAGCCACAA ACTGCGTGGC
GAAGTGATCA ACGCGCTGAT CTACCCGGCT TTCCTGGTGA TCGGTGTGGT CGGCTCGCTG
GCGCTGCTGC TGGCCTATGT GGTGCCGCAA TTCGTACCGA TCTTCCAGGA CCTGGGCGTG
CCCATCCCGC TGGTGACCCG CGCTGTGCTG GCCATGGGCG AATTCGTCAA TGCCTGGGGG
CTGGCCTGCC TGCTGACGCT GCTCGGCGCC GGCTGGCTTG GCCTGGCCGC ACGGCGTGAC
CCGCGCCGGC GAGTGGCCCA GGACCTGCGC CTGTGGCGCA ACCGCCTGTT CGGCCCGCTG
CTGCAGCGCC TGGAAACCGC ACGCCTGGCG CGCACCTTGG GCACTTTGTT GAGCAACAGC
GTCACCCTGC TCGGTTCACT GGCGATCGGC CGCGAAGTCA GTGCCAACCA TGCACTGCGC
GAGCATGTGG AGCGCACCAC CGACCAGGTC AAGCAAGGCA GCAGCCTGAG CCTTGCGCTA
TCGGCAGAGG CTCTGCTGCC GGAGCTTGCC CTGCAGATGA TCGAAGTCGG TGAACAGTCG
GGCACCCTCG GCGCGATGCT GCTCAAAGTC GCCGATGTCT ACGACCTTGA AGCCAAACGC
ACCATCGACC GCCTGCTCGC GGCGCTGGTG CCCACCCTGA CCATCGTCAT GGCGGTGATG
GTGGCGGCAA TCATGCTCGC CATCATGCTG CCGCTGATGA GCCTTACCAG CAATATCTAG
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| Protein sequence | MPTFSYTALD SEGRKQQGEL DASDRDHAAR QLQRRGLLIL QLRQGSRLLR SGKARSMFQP
VELITITQQL TTLLSAGQPL DRALGTVLKN VRRPAAKAVL ERVREQVKAG LPLSQALEEH
PGSFSPFYTS LVRAGEAGGV LEVTLAQLAG YLEQSHKLRG EVINALIYPA FLVIGVVGSL
ALLLAYVVPQ FVPIFQDLGV PIPLVTRAVL AMGEFVNAWG LACLLTLLGA GWLGLAARRD
PRRRVAQDLR LWRNRLFGPL LQRLETARLA RTLGTLLSNS VTLLGSLAIG REVSANHALR
EHVERTTDQV KQGSSLSLAL SAEALLPELA LQMIEVGEQS GTLGAMLLKV ADVYDLEAKR
TIDRLLAALV PTLTIVMAVM VAAIMLAIML PLMSLTSNI
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