| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2158 |
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| Symbol | |
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| ID | 6111111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2402505 |
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| End bp | 2403980 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641621953 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001749027 |
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| Protein GI | 170721339 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.714996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CCGTGCTTGC CCGCGAGACC AACCGCCGCC AGCTTCAGCA AATCATCGCC
GGGCTGTCCG ATGGTGTGAT CCTGCTGGAG GTCGACCAAT CCATCATCTG GGCCAACGAA
GCGGCTTTGC GCATGCACGG GGTCGACAGC CTGGAGCAAC TGGGCAGCAA CGCTCAGGGT
TATCGCGAAC GCTTTGCCCT GCGCTACCGC AACAATCACC CCCTTGACGC CGAGCAGTAC
CCTATCGCCC GCGTGGCTGC GGGGGAGGTG TTCAGCGACG TGATGGTAGA GGTGCTGGCT
GTTGGCGACG ATGAAGCGCG CAGCCGCGTG CACCGCGTGC GCAGCATGGT GCTGGAAGAC
AGCAAGGGCG AGGCCGAATC GCTGGTGCTG ATCCTGGCCG ATGCCACCGA GTGGGCCAGC
GCCGAGCAGC GTTTCGAAAA AACCTTCAAT GCCAACCCGG CCCCTGCAGT CATCTGCAGG
CTCAGCGACC TGCGCTTCAT CAAGGTCAAC CAGGGCTTTC TGGAAATGAC CGGCCATATG
CGGGAGAACG TCATTGGCCG TTCGGTATAC GAAGTGGATG TGCTGGAAAA CGCCGAACGC
AAAGAATTGG CAATCGAACG TCTGATGGAA GGGGCGACCA TCCCGCAGAT GCAGGCTGAA
CTGCGCTTGC CCGATGGTGG CAGCAAACTG GTGATCGTTG CCGGGCAACC ACTGGACATG
CATGAAGAAG ATTGCATGCT GTTTTCATTC ACCGACCTGG AGCCCCGGCG AAAGGCGGAA
AATGCCCTGC GCCAGAGTGA GGAGCGCTTT GCCAAGGCCT TTCGCCTGAG CCCTGTGCCC
ACCCTGTTGT GCAGCGCCGA CAGGCAGCAG CTGATCGATG CCAATGAAGC CTTTCTGGAC
ACCTTGGGTT ACGCCGCCCA GGAGCTGATA GGCAAGACAG TGGCCGAAAT CGACTTCATG
GCTGATCGGC GTGTTGCTAC CCAGGTGTTC GATGCGCTGG AAAAGACCGG GCGCATCGAA
GGGCTGGACC TTAAGCTGCG AAAAAAAGGC AATGACCGGC TCGACTGTGT ACTGCAGGCG
GACACCGTCA GCTTGCAGGA CACCCCGTGC TACCTGTTGG TACTGATGGA CATTACCGAG
CGCAAGCGTT CTGAGCTGGA GTTAGTCGAG GCGATAGAAA CGGTGATGCA GGATGCGTCA
TGGTTCAGCC AGACCTTGAT CGAGAAACTG GCCAATGCCA AGCGCATCAA CACAGGGCGT
TTACCAGATG CATCGTTTAC CGACCTGACC CGCCGTGAGC GCGATGTGCT GGCGCTGATC
TGTGAAGGCC TTGCCGACAA GGAAATCGCA ACGCGGCTTA ACCTGGCGCT CAATACCGTG
CGCAACCATG TGGCAACGGT GTACTCCAAG CTCGATGTTC ACAGCCGCAG TGAAGCCATT
GTCTGGGCGC GCGAACGACG GCTGTTCACC CATTGA
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| Protein sequence | MSDAVLARET NRRQLQQIIA GLSDGVILLE VDQSIIWANE AALRMHGVDS LEQLGSNAQG
YRERFALRYR NNHPLDAEQY PIARVAAGEV FSDVMVEVLA VGDDEARSRV HRVRSMVLED
SKGEAESLVL ILADATEWAS AEQRFEKTFN ANPAPAVICR LSDLRFIKVN QGFLEMTGHM
RENVIGRSVY EVDVLENAER KELAIERLME GATIPQMQAE LRLPDGGSKL VIVAGQPLDM
HEEDCMLFSF TDLEPRRKAE NALRQSEERF AKAFRLSPVP TLLCSADRQQ LIDANEAFLD
TLGYAAQELI GKTVAEIDFM ADRRVATQVF DALEKTGRIE GLDLKLRKKG NDRLDCVLQA
DTVSLQDTPC YLLVLMDITE RKRSELELVE AIETVMQDAS WFSQTLIEKL ANAKRINTGR
LPDASFTDLT RRERDVLALI CEGLADKEIA TRLNLALNTV RNHVATVYSK LDVHSRSEAI
VWARERRLFT H
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