| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2153 |
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| Symbol | |
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| ID | 6111106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2398832 |
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| End bp | 2399641 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641621948 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001749022 |
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| Protein GI | 170721334 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.778065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAG GTTCGACAGC GCTGGTCGCC ATCGTCGGTT CGCCCATCGC CCAGGTGAAA
TCGCCTGAAA ACTTCAACAC CTGGTTCAGC AACAATGGCC TTGACCTGGC CATGCTGCCC
ATCGACTTGC AGCACGCCGC GCTGGACGCT TTTATCGACA CCCTGCGCGG CTGGCGCAAC
CTGTGCGGTT GCGTGGTTAC CGTGCCTTAC AAGCAGGCAT TTGCCAGCCG CCTGGACGGC
CTGAGCGAAC GTGCAGCAGC CCTGGGCTCG GTGAACGTGG TACGGCGCGA AAACGATGGC
CGCCTGTATG GCGACAACGT AGACGGCGCA GGTTTTTTGG GCGCAGCACG CAAGCACGGC
TTCGACCCTG CGGGCAAGCG AGTGCTGGTC ATTGGTTGCG GCGGCGTCGG CAGTGCCATT
GCCTACGCAC TGGGTGAGGC CGGGGTCGCC CAGGTCACCC TCAGCGACCC CGAAACGTCG
CGCGCTGCAG CACTTGCCGA GCTGCTGGGC AAGGCCTTCC CTGGCGTCGG CATCACCACT
GCATACAGCG CGCTGGACGC CTTCGACCTG GTGGTCAACG CTTCGCCCGT GGGCATGGGC
GGCACGGGCG AGCTGCCACT GCCCGCTGCC CTGCTGGGCA CGCTCAACGC CGCCACGCTG
GTGGCCGATG TTGTCACCTC ACCGGAGATC ACCCCACTGC TGGAGCAGGC GCGCGAACGC
GGCTGCGCAG TCCAGACTGG CGCGCAAATG GCCTTTGCGC AGCTTGGCCA CCTGGGCGCC
TTCATGGGCG TCACGCCACT GGAGATCTGA
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| Protein sequence | MIKGSTALVA IVGSPIAQVK SPENFNTWFS NNGLDLAMLP IDLQHAALDA FIDTLRGWRN
LCGCVVTVPY KQAFASRLDG LSERAAALGS VNVVRRENDG RLYGDNVDGA GFLGAARKHG
FDPAGKRVLV IGCGGVGSAI AYALGEAGVA QVTLSDPETS RAAALAELLG KAFPGVGITT
AYSALDAFDL VVNASPVGMG GTGELPLPAA LLGTLNAATL VADVVTSPEI TPLLEQARER
GCAVQTGAQM AFAQLGHLGA FMGVTPLEI
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