| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2036 |
|---|
| Symbol | |
|---|
| ID | 6110989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 2266124 |
|---|
| End bp | 2267614 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641621831 |
|---|
| Product | xylulokinase |
|---|
| Protein accession | YP_001748905 |
|---|
| Protein GI | 170721217 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGAC TGTTTCTCGG CATTGATTGC GGCACCCAGG GCACCAAGGC GCTGGTGCTG
GACGCTGGCA GTGGCCGGGT GCTGGGCCTT GGTAGTGCCG CGCACGCGCC TGCACGGGGC
CGCGACGGGC GCCGCGAGCA AGACCCGGCC GACTGGCTCG CCGCCCTGCA CACGGCAGTC
GCTGGCGCGC TGCATGGGGC CGGCGTCAAT GGCCAGGCCA TCCGTGCGCT GGCGGTATCC
GGCCAGCAGC ATGGCCTGGT GATGCTGGAC GCCCAAGGCC AGGTACTGCG CCCGGCCAAG
CTCTGGTGCG ACACCGAAAC CACGGCAGAA AACCAGAAGC TGCTGAACGT GCTCGGCGGC
CCGCAGGGCT CGATCGAACG CCTGGGGCTG GTGATTGCGC CGGGCTATAC CGTGTCCAAA
CTGCTGTGGA GCAAACGCAG CTTCCCCGAC CTGTTCGCCC GCCTGGCCCA TGTGCTGCTG
CCCCACGATT ACCTCAATTA CTGGCTGACA GGCCGCGCCT GCAGCGAGCC GGGCGATGCG
TCTGGCACCG GTTACTACAA CGTGCACCAC AACACCTGGG CAACCGATGT GCTGCAACAC
ATCGAACCGG GCGAGCGCCT GCTGGCGGCA CTGCCCGAGC TGCTCGCACC CGGCGACTGC
GTCGGTCCGC TGCGCGAGCA GGCCGCCGCA GGCCTGGGGC TGAACCCTCA CGCCTGGGTG
GCCACCGGCG GCGGCGACAA CATGCTCAGC GCCATCGGTA CCGGCAATAT CAGCCCTGGC
ATGATTACCC TCAGCCTGGG CACCTCGGGT ACCCTGGCAG CTTACGCCGA CCATGCCCAG
TTCAACCCCA AGGGCGAGGT GGCGAACTTC TGCGCCTCCA GCGGTGGCTG GTTGCCCTTG
GTCTGCACGA TGAACCTGAC CAACGCCTGC GCGCTGGTAC GTGACCTGCT TGAGCTGGAC
CTCACCCGCT TCACAGCCCT CGCCGCCCAA GCCCCGGTCG GTGCCGAAGG CCTGTTGATG
CTGCCATTCT TCGATGGCGA ACGGGTACCC GCGCTGCCTA CTGCCAGCGC CAGCCTGCAT
GGTATGACCA GCGCCAACCT GACACGCGCC AACCTGTGCC GGGCCGTGCT CGAAGGCACT
TGCTTCAGCC TGCGCTATGG CCTGGACCTG CTGCACGCCA GCGGCCTGCA GGGCAGCGAA
ATCCGCCTGG TGGGCGGGGC GGCAAAAAGC GAGCTGTGGC GCCAGGTACT GGCCAATCTG
CTCGGCCTGC CAGTGGTGTG CCCGCGCCAG ACCGAAGCCG CCGCGCTGGG GGCGGCAATT
CAGGCTGCCT GGAGCCTTGG CCGCCAACTG GGCCACGGCG ACAGCCTCCA GGCCCTGTGC
GAGCGCTGCG TCGAGCTGGA CGAAAGCACC CGCACCCTGC CACGTCTGGC GCAGCAGGCC
GCCTATGGTG TGGCCTACAG ACGCTACCTG GATCACCTGC CTGCGCACTG A
|
|---|
| Protein sequence | MEGLFLGIDC GTQGTKALVL DAGSGRVLGL GSAAHAPARG RDGRREQDPA DWLAALHTAV
AGALHGAGVN GQAIRALAVS GQQHGLVMLD AQGQVLRPAK LWCDTETTAE NQKLLNVLGG
PQGSIERLGL VIAPGYTVSK LLWSKRSFPD LFARLAHVLL PHDYLNYWLT GRACSEPGDA
SGTGYYNVHH NTWATDVLQH IEPGERLLAA LPELLAPGDC VGPLREQAAA GLGLNPHAWV
ATGGGDNMLS AIGTGNISPG MITLSLGTSG TLAAYADHAQ FNPKGEVANF CASSGGWLPL
VCTMNLTNAC ALVRDLLELD LTRFTALAAQ APVGAEGLLM LPFFDGERVP ALPTASASLH
GMTSANLTRA NLCRAVLEGT CFSLRYGLDL LHASGLQGSE IRLVGGAAKS ELWRQVLANL
LGLPVVCPRQ TEAAALGAAI QAAWSLGRQL GHGDSLQALC ERCVELDEST RTLPRLAQQA
AYGVAYRRYL DHLPAH
|
|---|
| |