| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2016 |
|---|
| Symbol | |
|---|
| ID | 6110969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2247882 |
|---|
| End bp | 2248385 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641621811 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001748885 |
|---|
| Protein GI | 170721197 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.908198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAC AACCAATGCC GCCCATACGC ACGCCTTCTC CCGCAAAACT CTCCCCGCAA
AGCCAGGCGC TTGTCGATCA ATTTCACCTT GAAGACATCG TTTCCCACCT GCTGCGGCGG
GCTCACTTCA TGGCGGAGGA ACGGTTCAAC ACAGCGTTCG CCGGAGAGTC GATCACCCCC
AGACAGAAAG CCGCATTGAT TGTGGTGTCG CAGCACCCCG GCCTGACCCA GAACGCACTG
GCCGGCCATT TGTTCATGGA TCGCAACACT GTTGCCGAAA TGGTCAAGAG GCTGTGCGCC
AGCGGCATGC TGGTGCGCAC CAGCGCCAAG AGCGACCAGC GTGCGTACCA GTTGTATTTG
GGCAATGAAG GCGCTGAACT GCTTGAGCGC GTACTGCCGC GTGATGCCGA AGTGGAAAGC
AAATTGCTGG AACGGTTGCC TGAGGAATAC CGGCCGCTGT TCCTGAAGTG CCTGAAGCTG
ATTGTCTCGC CTGAGGAGGC GTGA
|
|---|
| Protein sequence | MTGQPMPPIR TPSPAKLSPQ SQALVDQFHL EDIVSHLLRR AHFMAEERFN TAFAGESITP
RQKAALIVVS QHPGLTQNAL AGHLFMDRNT VAEMVKRLCA SGMLVRTSAK SDQRAYQLYL
GNEGAELLER VLPRDAEVES KLLERLPEEY RPLFLKCLKL IVSPEEA
|
|---|
| |