Gene PputW619_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1906 
Symbol 
ID6110857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp2138217 
End bp2138705 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content59% 
IMG OID641621701 
ProductDoxX family protein 
Protein accessionYP_001748778 
Protein GI170721090 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.646959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.313164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCT TGACCCGCAC CCTGTCCGCC TTCGAACGCT TCGGAACCTG GAGCGCCGAC 
CTGCCGTTAC GGCTGTTCCT GGCCTGGGAA TTTTTTGAAT CCGGCCTGGA GAAATTCAAC
GCCAGCAACT GGTTCGGCGA CATTCAAGGC AGCTTCCCGT TCCCCTTCAA CCAGCTGCCG
GCAGAGCTGA ACTGGCAGCT GTCGATGTGG GCTGAGTTGA TACTGCCGTT GCTGCTGTTG
CTGGGCCTGG GGACGCGGCT GGCGTCATTG GGGCTGATGG TGGTGACCGT AGTGGCAATT
GCGGCGGTGC ACTGGCCGGC GCACTGGTCG GGCCTGGCTG AGCTCGCCCA GGGATATACG
ATTACTGACC AAGGTTTTGG CAACTTCAAA TTGCCCTTGA TCTACCTGGT AGCGTTGTTG
CCACTGCTGC TGAAAGGGGC CGGGCGATTG AGCCTCGATC ATTGGCTTGG AATGCAGTTC
AGCAAGTGA
 
Protein sequence
MTTLTRTLSA FERFGTWSAD LPLRLFLAWE FFESGLEKFN ASNWFGDIQG SFPFPFNQLP 
AELNWQLSMW AELILPLLLL LGLGTRLASL GLMVVTVVAI AAVHWPAHWS GLAELAQGYT
ITDQGFGNFK LPLIYLVALL PLLLKGAGRL SLDHWLGMQF SK