| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1688 |
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| Symbol | |
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| ID | 6110634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1876635 |
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| End bp | 1877573 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641621480 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001748562 |
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| Protein GI | 170720874 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0669222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC ACAACCTGAA CGATATCGCC GCGTTTGTAA GCTCGGTAAA CGCTGGAAGC
TTCACTGCGG CGGCAAAACA GCTTGGCCTT ACGCGCTCTG CAGTGGGGAA GTCGATAGTC
AGGCTCGAGG CTCGTTTACA GGTACGTTTA CTGAATCGCA CTACGCGCAG TTTAAGCATG
ACGGATGACG GCCAGGTTCT GTATGAGCGC TGTGTGGGCG TTCTTCAGGA TCTGGACGAC
GTGGAGGATG CCCTTGCGTT TCGTCGTTCG ACTCCCAGTG GGCGACTGCG GATGAGTTTG
CCGGTTGCGC TTGGCAGACT TCATGTCCTT CAACACATTG AGTACTGCCT TAAGGATTGG
CCCTCCCTGA GCGTGGATAT CACCTTTTCT GACAGGCTGG TCGATTTGAT TGACGAGGGA
TTTGATTTGG CCATGCGCAT CGGGCCACCG AAGGAAGATT CTCGGTTGTT AACGCGCACT
GTGGCCTACC AACAAATGAT TACCTGCGCT TCCCCCACAT ATTTGGCTGA GCATGCCGAG
CCTAAAACGC CTGAGGATTT AACCGGGCAC CAGTGCCTGC ATTTCGTGAG CGGTGGGAGA
TTGCTTCCTT GGAATTTTCG CGTGAATGGT AGCGCTGTGT CCGTTACTCA TGGTGGAAGG
CTACAGATGG ACAGTGCTGA GTCATTACAC CAGTCAGCTG TAGCTGGCCT GGGCATCGCG
ACTCTTCCTT CCTACGTGGT GAACGACGAT TTGAGGAGCG GCAAGCTTGT TCAATTGCTC
GCTGGGTATG CAGAGGCCGC AGAGCCTATT CGGGTGATCT ACCCTAGCAA GCGGCACCTC
TCTCCAAAAA TTCGACTCTT CATCGATAAG CTCGTGGAGG CTTGGTCACC ATGCCCACCA
TGGGAGCAGC ATTCTGCGGA ACGCATTCAC TCTGTCTGA
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| Protein sequence | MELHNLNDIA AFVSSVNAGS FTAAAKQLGL TRSAVGKSIV RLEARLQVRL LNRTTRSLSM
TDDGQVLYER CVGVLQDLDD VEDALAFRRS TPSGRLRMSL PVALGRLHVL QHIEYCLKDW
PSLSVDITFS DRLVDLIDEG FDLAMRIGPP KEDSRLLTRT VAYQQMITCA SPTYLAEHAE
PKTPEDLTGH QCLHFVSGGR LLPWNFRVNG SAVSVTHGGR LQMDSAESLH QSAVAGLGIA
TLPSYVVNDD LRSGKLVQLL AGYAEAAEPI RVIYPSKRHL SPKIRLFIDK LVEAWSPCPP
WEQHSAERIH SV
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