| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1648 |
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| Symbol | |
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| ID | 6110594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1829436 |
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| End bp | 1831364 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621440 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001748522 |
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| Protein GI | 170720834 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.933829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCC GCCTGTTACA GATTGCTTCC TGCCTGCTGC TTACCGCCGC CACCGCCAGC
GCGGCGCAGG CCATAGACCT CTCTCAGCAA CGTCAGTACT ACGACGAGGC CAAGCGTGCA
TTGGCCAAGG GCGACAAGGG CCCTTACCTT CGCTACGCCC AGGCCCTGCG CGATTATCCG
CTGACGCCCT ATTTGGCCTA CGACGAACTG ACCGCTCGGC TGAAAAGCGC CAGCAACCAG
GAAATCGAAG CGTTCCTGGC CAAACATGGC GACCTTCCCC AGGCCAACTG GATGAAACTG
CGCTGGTTGC GCTGGCTGGC CGAACGCGGC GAGTGGAACA CCTTCGTCAA ATACTATGAC
CCCAAGCTCA ACTTCACCGA ACTGGACTGC CTCAACGGCC AGTACCAGCT GAGCCATGGC
CTGCGCGCCG AAGGTTATGC CAGCGCCGAA AAACTGTGGA ACGTGGGCAA GTCGCAACCG
GCCGCCTGCG ACACCCTGTT CGGTATGTGG GCCGCCGAAG GTCAGCTGAC TGAGGCCAAG
CGCTGGAACC GTGCCAAGTT GGCAGCCCAG GCGCGTAACT ACTCCCTGGC CAACAGCCTG
GTCAAATCGC TGACCACGCT TGGCCCGCAA GGCCGCCTGC TGGTCGATGT CGCGCAAAAG
CCAGAACTGC TCAACCAGCC GTCGCGCTTC ACACCGGTCA ACGAGGCCAT GTCCGATGTC
GTCAGCCTGG GCCTGCGCCG CCTGGCTCGG CAAGACCCTG AACGCGCCAT GGCCCTGCTT
GACGACTACG CCCAGCGCAT GCACTTCTCC CGCGATGAAA AAGTGGCTAT CGCTCGTGAA
ATCGGCCTGA CCCTGGCACG CCGCTATGAC CCACGCGCTC TTGACCTGAT GACGCGCTAC
GACCCTGAGC TGCGGGACAA CACGGTCAGC GAATGGCGTC TTCGCCTGCT GCTGCGCCTG
GGCCGCTGGG AAGATGCCTA CGAACTGACC AAGCGCTTGC CGCAGGACCT GGCCAGCAGC
AGCCGCTGGC AATACTGGCA AGCGCGCAGC CTGGAACTGG CCCAGCCAAA CAACCCGCAA
AGCCTGTTGC TGTACAAGAA CGTGGCGCGC GAACGGGATT TTTACGGATT CCTCGCGGCC
GACCGGGCGC AAACGCCCTA CCAGCTCAAC AACAGACCAC TGGTACTGAG CCCGCAACTG
GTCAGCAAAG TACGCAATAC TCCCGGCATC CAGCGCGCCC TGGAGTTCCA CGCCCGCGGC
CAGATCGTCG ACGGTCGCCG CGAGTGGTAT CACGTTAGCC GCCACTTCAG CCGCGACGAA
ATGGTTGCCC AGGCGCGCCT GGCCTATGAC CTGCGCTGGT ATTTCCCGGC CATTCGCACC
ATTAGCCAGG CCAAGTACTG GGACGACCTC GATATCCGCT TCCCGATGGC CCACCGCGAC
ACGCTGGTAC GCGAAGCCAA GGTGCGTGGG TTGCACTCAA GCTGGGTGTT CGCGATCACA
CGCCAGGAAA GCGCTTTCAT GGAGGATGCG CGCTCCAGTG TAGGTGCCAG CGGCCTCATG
CAGTTGATGC CGGCCACAGC CAAGGAAACA GCGCGCAAGT TCAGCATTCC GCTGGCGTCG
CCGCGCCAGG TGCTCAACCC GGACACGAAC ATTCAGCTGG GCGCAGCTTA TCTGAGCCAG
GTACACGGCC AGTTCAACGG CAATCGGGTG CTGGCGTCGG CAGCGTATAA CGCCGGCCCC
GGGCGCGTAC GTCAATGGCT CAAGGGTGCC AAGCACCTGA GCTTCGATGT GTGGGTGGAA
TCGATTCCGT TCGACGAGAC GCGTCAGTAT GTGCAGAACG TGCTGTCTTA CTCGGTGATC
TACGGGCAGA AGCTCAATGC ACCGCAGCCG TTGGTAGATT GGCACGAGCG GTATTTCGAC
GACATGTGA
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| Protein sequence | MRSRLLQIAS CLLLTAATAS AAQAIDLSQQ RQYYDEAKRA LAKGDKGPYL RYAQALRDYP
LTPYLAYDEL TARLKSASNQ EIEAFLAKHG DLPQANWMKL RWLRWLAERG EWNTFVKYYD
PKLNFTELDC LNGQYQLSHG LRAEGYASAE KLWNVGKSQP AACDTLFGMW AAEGQLTEAK
RWNRAKLAAQ ARNYSLANSL VKSLTTLGPQ GRLLVDVAQK PELLNQPSRF TPVNEAMSDV
VSLGLRRLAR QDPERAMALL DDYAQRMHFS RDEKVAIARE IGLTLARRYD PRALDLMTRY
DPELRDNTVS EWRLRLLLRL GRWEDAYELT KRLPQDLASS SRWQYWQARS LELAQPNNPQ
SLLLYKNVAR ERDFYGFLAA DRAQTPYQLN NRPLVLSPQL VSKVRNTPGI QRALEFHARG
QIVDGRREWY HVSRHFSRDE MVAQARLAYD LRWYFPAIRT ISQAKYWDDL DIRFPMAHRD
TLVREAKVRG LHSSWVFAIT RQESAFMEDA RSSVGASGLM QLMPATAKET ARKFSIPLAS
PRQVLNPDTN IQLGAAYLSQ VHGQFNGNRV LASAAYNAGP GRVRQWLKGA KHLSFDVWVE
SIPFDETRQY VQNVLSYSVI YGQKLNAPQP LVDWHERYFD DM
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