| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1562 |
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| Symbol | |
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| ID | 6110503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1724188 |
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| End bp | 1725399 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621349 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_001748436 |
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| Protein GI | 170720748 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.272758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATC AATGGGATGC CGGGCGACTG GACAGTGACC TCGAGGGTGT CGGCTTCGAC
ACCCTGGCGG TGCGTGCCGG TCAGAACCGT ACACCGGAGG CGGAGCACAG CGAAGCGCTG
TTCCTGACCT CCAGCTATGT CTTCCGCACG GCTGCCGATG CGGCTGCTCG CTTTGCCGGT
GAAACCCCGG GCAACGTCTA CTCGCGCTAC ACCAACCCGA CCGTGCGTGC CTTCGAGGAG
CGCCTGGCGG CAATGGAAGG TGCAGAGCAG GCCGTGGCCA CCTCTACCGG CATGGCAGCG
ATTCTGGCCG TGGTGATGTC GTTGTGCAGC GCCGGCGACC ATGTGCTGGT GTCGCAGAGC
GTGTTCGGCT CGACGATCAG CCTGTTCGAG AAGTACTTCA AGCGTTTCGG CGTGCAGGTG
GACTACGTGC CGCTGGTCGA TCTGGCGGGT TGGGACGAGG CCATCAAGGC CAATACCAAG
CTGCTGATCC TCGAGTCGCC TTCCAACCCG CTGGCCGAAC TGGTGGACAT TGCCGCGCTG
GCAGAAATTG CCCATGCCCG TGGTGCCATG CTGGTGGTGG ACAACTGCTT CAGCACACCT
GCACTGCAGC AGCCGCTCAA GCTTGGCGCT GACATCGTGT TCCATTCCGC TACCAAGTTC
ATCGACGGCC AGGGCCGTTG CATGGGCGGC GTTGTTGCCG GGCGCAGCGA GCAGATGAAA
GAAGTGGTGG GCTTTTTGCG CACCGCCGGC CCGACCCTCA GCCCGTTCAA CGCCTGGATC
TTCACCAAAG GCCTGGAAAC CCTCAAGCTG CGCATGCGTG CGCACTGCGA GAGCGCTCAG
CAGCTGGCCG AGTGGCTGGA GCAGCAGGAG GGTATCGAGA AGGTGCATTA CGCCGGCTTG
CCAAGCCATC CGCAGCACGA ACTGGCCAAG CGCCAGATGA GCGGTTTTGG TGCGGTGGTG
AGTTTCGAGG TAAAGGGTGG CAAGGAAGGC GCCTGGCGCT TCATCGATGC AACGCGGGTG
ATCTCGATCA CCACCAACCT GGGTGACAGC AAGACCACTA TCGCGCACCC GGCCACCACC
TCTCACGGCC GCCTGACGCC GCAGGAGCGT GAGGCTGCAG GTATTCGCGA CAGCCTGATC
CGCGTTGCCG TCGGCCTGGA AGATGTGGCC GACCTGCAGG CCGACCTTGC GCGTGGGCTG
GCAGCGCTGT GA
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| Protein sequence | MTDQWDAGRL DSDLEGVGFD TLAVRAGQNR TPEAEHSEAL FLTSSYVFRT AADAAARFAG
ETPGNVYSRY TNPTVRAFEE RLAAMEGAEQ AVATSTGMAA ILAVVMSLCS AGDHVLVSQS
VFGSTISLFE KYFKRFGVQV DYVPLVDLAG WDEAIKANTK LLILESPSNP LAELVDIAAL
AEIAHARGAM LVVDNCFSTP ALQQPLKLGA DIVFHSATKF IDGQGRCMGG VVAGRSEQMK
EVVGFLRTAG PTLSPFNAWI FTKGLETLKL RMRAHCESAQ QLAEWLEQQE GIEKVHYAGL
PSHPQHELAK RQMSGFGAVV SFEVKGGKEG AWRFIDATRV ISITTNLGDS KTTIAHPATT
SHGRLTPQER EAAGIRDSLI RVAVGLEDVA DLQADLARGL AAL
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