Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1353 |
Symbol | |
ID | 6110281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 1471306 |
End bp | 1476798 |
Gene Length | 5493 bp |
Protein Length | 1830 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641621127 |
Product | hypothetical protein |
Protein accession | YP_001748227 |
Protein GI | 170720539 |
COG category | [S] Function unknown |
COG ID | [COG4733] Phage-related protein, tail component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.169876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGAAGCT CGATCAAGTC AGTCGTCAAG CTCGTCACCG CGCCCATCAA GGCGCTTTAC GACCCGGTTG GCGCATTCAA GGATGTGTTC GGTGGTGTGC AGGGCATTTT CGCGGGCCTC ACCGGCGCAG CCAAGGTCTC AGGTGCCAGC AGCTCTGAGC CCAGCTCCCA GACCGTACGC TCGTCCAAGG CACCGGTGCG CTTCATTCTT GGCCGGGCCA GCACGGGCGG TGTGCTTGCT TGGGTTCAGG AAGAACCAGG TGACCAGACC GGTGGGGAGT GGTTGCATAT CGTCTACGTC CTCTCCGAAG GCGCCATCGC AGGCGTCGAC GAAATCTACG TGGACGAGCG GCCGCTGTCC GATCTGGGCG AGAATGCCAC CTCCGAAGTC ATCATCAATC CGGGCCAGGT AAATGCTTTC TTGCTGAGCA AGTGCCCAGA CTGGCGCCAG GAGCAGATCG GCCGCGGGCT TTCGTTTGTG CGTCTGTCGT TCAAATATGA CGCAGAGAAG TTCCCGTCCG GCATTCCTGA TGTGCGCTTC GTAGTGCGCG GGCGCAGCGA CGTGTATGAC CCACGCAACG GGGCAGTGGG CTATTCGGCC AACACCGCGC TGCTGATCCT ATGGTATCTG CGCAACCGTT GTGCGATTCC TGACGACGAA ATCATATTCG ATTCTTTCGC CAGCTCTGCC AACGTCTGTG ATGAGCCCGT GTTTGGCCCG GATGGTAAAA TTTCGCCTCG CTACTTCGCT GGCGCGGTCA TTGGCGCCGA TGAGAAGCGA AATACCGTTC TGGACAACCT GCTGTCGGCA TGTGCCGGGA CGCTGATCAG GGTAGGTGGC CGGTGGTCAC TCCAAGTTGG CGCCTACTAC GGGCCGGCCG ACTTCACCGT GAACGAAGAC ATGGTGATCG GTACCGTCGA GGGTACGACC GAGGTCAGCA ACAGCGATGC CATTAACACC ATGCGCGGGA CTTTTGTTGA CCCGGCCCAA GCCTGGGCAG AGACCGACTA CCCGGAGGTC GCGATACAGG ACTGGATCAC CAAAGACGGT GGTGAGCTCG CTGAGTCGCA GTCGTTTGCC TATGTGACAG ATGCTTACCT GGCGCAGCGG CTTGCAAACA TCAGCCTCCG CCGCCGTCGC TCGGGTGGCT CCCTCTCCGT GCCGCTGAAC TTCAATGGTT ACAACTGCCG TCCGGGGCGC GCAGTCAAAG TCGATCTGCC ATCGCTGAAC ATTCTTGGCG AGTTCATGGT CACCGAATGG ACCATGGGGG CGGCCGATGC ATGCAAGGTG ACCCTCAAAC CGTACGAGCA AGCCATCTTT GATGATGCTG TGGGCCAGCC CTACGACCCG CTGGGGTTTA TCAACCTGCC GGTCGGCGGC CTGGCCGCTG TCACCGGATT GGCCTGGGCG CCGAGCGGCG TGGCCGAGGT CATTCAGGGC GTACTCAGCT GGACGCCACC GCTGCAGACG GTGCTGAGCT ACACGGTGAC GATCCGCAAG GGCACTGAGG TCGTGCAGTC CCTTAAGGTC GGCGGTGAGG CCGCCAGCTG CAACATCAAT GGCCTGACGT CGGGTGTCTA CACCATGAGC GTCATTGCCT TCGGCCCTGG CACACGTTCG GGCGAGGCGA CCATCAATGT CAACGTGGGT GGTCCTCCGG TGCCCGAAAG CTGCGCCTTC TATGCGTCGG TGGACACCAT CACGCTGGTG CCAGCCAACC GGCAGAGCAG CCTTAATGGC GGTACCTATG AATACTTCTA TACCACCAAC CCTTCGGCAC CGATCGCGGA CGCCGTGTAC TTGGGCCAAG GGTTGACCTT CACCCACACT GGACTGGCAT TCGCCAAGGA GTACTTCTAC TACGTGCGGT CGGCAAATGC GTACGGGAAG AGTGATTTCC TGTTCGTGCC TGCTGCAACA TCCAGTGATC CAACCCAGAT GCTGGAAGTC ATTGCGGGTA GGATCACCGA GAGCGAGTTG GGTCAGGAGC TCACCGACCG CATCGACCTG ATCGACAAAG AGGGCCCGGG CTCCGTCAAC GAGCGCCTGG GTGAGGTTCG CAGCGACCTG AACCAGCAGA TCGTCGACGT CAACAACTCG CTGGGGCAAG TGCAGTCCGA GTTGCAGCAG CAGATCGACA GCATCGCCGA TCTGGCCGAC TCGATGCCGT ACAAGCCCGA CCAGGCCTAC ACAGCTGGCC AAGGTACGTT GGGCGAAGAC GGCAAGCTGT ACCAGGCCAA GGTTAACGTC CCGGCCGGCA ATCCGCCGCC CAACGCGACC TACTGGACCG ACATTGGCCA GGCGGTGCAG ACGGCAAACG GTCTCGCCGC GCGCGTCGGT ACCGTGGAGA CCAGCATCAC AGAGTTGAAC GGCGAGGTTG ATGCCCAGGC CCAGCAGATC GATGGCTTAC GGACCAGCAT CGACGGGAAG GCTGACGCCT CGACGGTAAG CAGCCTGTCG AACCGTGTCA CGCAGAACGA GCAGGGCCTT TCCAGCCAAG GCCAGGCCCT CACCGGCGTA CAGAACAGCC TCAACACCAC CAACCAGAAC GTGACCGCAG CTCAGCAGGC CGCCCAAGCC GCTGCCGATG CTGCTGGCGC CAAGGGCAAG GTGCTGTACC AGTCGACCGC GCCGGCAGTC GCGGACCGCC TGGCGCAGAA TCTCTGGATC GACACGACCG GCAATGCCAA CACGCCCAAA CGCTGGAGCG GCAGCGCTTG GGTGGCCGTG ACCGACAAGG TAGCGACGGA CGCAGCAGCT GCTGCCGCCA GCGCACTGAG CCAGGTCGCT ACCAAGGCTG ATGCCTCGAC GGTGCAGGCG CTGACCAACA CCGTGACCCA GCAAGGTCAG GACATTACGG CGGCCGGTCA GGCCATCACC AGCATCAGCA CGTCGCTCAG CCAGGCGGGC GGTGAGAACC TGCTTTACAA CCCGTCGTTT GATAAAGCAT CGGCTGCTAG CGCTAACGTC GCTGATGGGT GGTACTGGCG CACGCAAACC GCCGTCGCTG TAGTGCCGTC GCTTCTGCCA TCGGCCTTGG GAGCTGGCGG CAAACGGCAA AGACTGGAAG TATCGGGGCT GATAGCCGGT ACCGGCACTC ACTACGTTGA TTTCGTGCCC GAGTCGGCTC CTGCTGACTT CCGCCCCCCC GTCTATGAGG GGGTCGTAGG CACTGCATCT ATCTATATCC GTGGAAGCTC GGGGTTGATG GTGCAGATCT ACATGCAGTA CAAGGATGCG GCCGGGGTGA CGATAGGTAC TCACGGCCCC GTCAACGTCA GCACCTCTCC CGTCGAGTCG TACAACCGCA TCGTACTCAC CGGACTAGCC GCACCTGCGG GTTCGGTGCG AGTAGACATT CTCTACCGGA TCAGATCTGC TCCGGGGTCT AGCATCACGG CCGGTTTTGT TGACCTGGAT AAAGCACAAT ACGAACATAG TCCTGTTGTG ACGGGCTGGC GCGACAATGG GCAGGTCAAT GCATCCGCTA TTGCGGCCAA CGCCACTGCC ACCACAGCAC TGACCGGCCG GGTAGGCCTC ACGGAGCAAG GCCTCACTAG CGTTTCGGGC AGCATCACCG AATTGAACAA CACAATTGGC GATGTTGGTG GTGAGAACCT GTTCTACAAC CCCACTTTCA ATGCTAACGG CTCCGGATCA GATATCGCCG ATGGCTGGGC CATGGAAGGT TCGGCCGTGA GTGTGGATTC CAGAGTCACT TCTTGGCTCA ACTCCGGGGA GAAAGCAATC CGAGTTGAGG TTGCAGGCGT GGGGAATGCC GGCCCCTACA AATCCGTGCG CCCCACTGGT GGAACGCCAG ATCGAAGACC CAAAGTAGCG GAAGGCCAGA CCTTGACGGC GTCTGTTTAT CTTCGCGGTA CTGCCGGTTT GGGGTTTAGG TTCTTCCTCC AATGGATCAA CGCTGCGGGT TCTTCGATAA GCGCACCGAA CTCGTTGATG CTCACCGTCA CACCCGGAGG TGAACGCGTT CAATACAGCG GCGTTGCACC GGCCGGTGCC GTTAGTTGCT ACGTTTATCT CAGGATTTAT AGTGCTACTG GTGCCGTCAC ATCAGGCCAT GTCGAAATGG CCAGACCCCA ATTCGAGTAC GGCACACGTG CTACAGGTTG GCGCGATAAC GGTCAGGTCA ATGCGGCGAC TACTTCGGCG GTTTCGACAG CGGTAGATAG CCTTGGCTCT ACAGTGACCC AGCAGGGCAA CAGCATCACT AGCGTCTCTA ACCGGACCAC ATCGCTGGAG AACTCGGTCA ATAGCACGAC TAATGGACTC GCCACCAAGG CCTCGGCCTC GGCGGTGGAC GCGCTGACCA ACCGTGTTTC GGCAGCGGAG GGGGTCAACA CCAGTCAGTC CAGCAGCATC ACCGAGCTCA ACAACAACGT TGGCGCAATC CAAGATGCGC TGGGGGCCTC CGGTCTCGAT CCAGCACCCA ACTGTTTGTG GCAATTTGAT AGCACTACCG AAGGCTGGGT GGCTTCGGGC GCAACGCTGG CGCAGGGGGC TGGGTTCGTC AAAATCACTT CGACCGGTTC GGATCCGCAG CTGCACAGCG GTACGGCGGC GACGTTGTCT ATCACAGGCA GTCTCTACAG CCGCGTGCGG GCGCGCATCA CCCGTCGGGC CGGTGCCGTT ACGGACTGGG ATGGCCAGTT GTTCTACCAG ACCGCTGGTC ACGGGTTCTC GGGTAGCTAT CGAGCAATCG CGGCTAACCC GAACTTGGCA GTAGGAGAAT CGGCAGTGGT CGAGTGGGAC ATGGCCAACC TGGCAGCAGG CGGAACGGAC TGGGTGGACA GCACTATCAC TCGGCTTCGC TTGGACATGG GAGCTACAAG TGGCGGCGCT TTCGATGTGG ACTGGGTTGC CGTCGGCAGG GTTGCGCCAT CGGCCTCCAG TCGTGCAGTG GAGTCGTTGA CCTCGACCGT GACTCAGCAA GGCGATGATC TTAGCGCCCA GGCGCAACAG CTCACCGGCC TGCAGACCTC GGTTGGTAAC AACTCGGCGT CGATCCAGCA GGTAGCCAAT GCCCAATCCA CGCTCAACGG GAAGATCAAC GCGTCCTACT CGGTGAAGCT CCAGGTCACC GCTGGTGGAC AGTACGTTGC TACTGGCTTC GGTCTGGGCG TTGAGAACAG CGGGGGAGTG CTGCAATCGA CGTTCGCGGT AATGGCGGAT CGGTTCGCAG TCCTTAATCC TGCAGGGAAC GGGTTTATTA GTCCATTCGC GATCCAGAAC GGACAGGTAT TTATTAACGA TGCTCTAATT TCAAAGCTGT CCGTGCAGAA TGCCATCGTC GGTACAACCA TCGCTTCATC TACCTATTCG CAATTTGGTG AGCCTCTTAT GACGCTGAAC TTCAATTCGG GAGAAATCAT CATGCGTAAC TGGAGTCGGC AACTTACCTA TACCAAGATC AATAATGATG GCATCGACGT TGTAGTTGAC GGTGTCCGCC GAGTTCGGAT GGGGGTGTGG TGA
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Protein sequence | MGSSIKSVVK LVTAPIKALY DPVGAFKDVF GGVQGIFAGL TGAAKVSGAS SSEPSSQTVR SSKAPVRFIL GRASTGGVLA WVQEEPGDQT GGEWLHIVYV LSEGAIAGVD EIYVDERPLS DLGENATSEV IINPGQVNAF LLSKCPDWRQ EQIGRGLSFV RLSFKYDAEK FPSGIPDVRF VVRGRSDVYD PRNGAVGYSA NTALLILWYL RNRCAIPDDE IIFDSFASSA NVCDEPVFGP DGKISPRYFA GAVIGADEKR NTVLDNLLSA CAGTLIRVGG RWSLQVGAYY GPADFTVNED MVIGTVEGTT EVSNSDAINT MRGTFVDPAQ AWAETDYPEV AIQDWITKDG GELAESQSFA YVTDAYLAQR LANISLRRRR SGGSLSVPLN FNGYNCRPGR AVKVDLPSLN ILGEFMVTEW TMGAADACKV TLKPYEQAIF DDAVGQPYDP LGFINLPVGG LAAVTGLAWA PSGVAEVIQG VLSWTPPLQT VLSYTVTIRK GTEVVQSLKV GGEAASCNIN GLTSGVYTMS VIAFGPGTRS GEATINVNVG GPPVPESCAF YASVDTITLV PANRQSSLNG GTYEYFYTTN PSAPIADAVY LGQGLTFTHT GLAFAKEYFY YVRSANAYGK SDFLFVPAAT SSDPTQMLEV IAGRITESEL GQELTDRIDL IDKEGPGSVN ERLGEVRSDL NQQIVDVNNS LGQVQSELQQ QIDSIADLAD SMPYKPDQAY TAGQGTLGED GKLYQAKVNV PAGNPPPNAT YWTDIGQAVQ TANGLAARVG TVETSITELN GEVDAQAQQI DGLRTSIDGK ADASTVSSLS NRVTQNEQGL SSQGQALTGV QNSLNTTNQN VTAAQQAAQA AADAAGAKGK VLYQSTAPAV ADRLAQNLWI DTTGNANTPK RWSGSAWVAV TDKVATDAAA AAASALSQVA TKADASTVQA LTNTVTQQGQ DITAAGQAIT SISTSLSQAG GENLLYNPSF DKASAASANV ADGWYWRTQT AVAVVPSLLP SALGAGGKRQ RLEVSGLIAG TGTHYVDFVP ESAPADFRPP VYEGVVGTAS IYIRGSSGLM VQIYMQYKDA AGVTIGTHGP VNVSTSPVES YNRIVLTGLA APAGSVRVDI LYRIRSAPGS SITAGFVDLD KAQYEHSPVV TGWRDNGQVN ASAIAANATA TTALTGRVGL TEQGLTSVSG SITELNNTIG DVGGENLFYN PTFNANGSGS DIADGWAMEG SAVSVDSRVT SWLNSGEKAI RVEVAGVGNA GPYKSVRPTG GTPDRRPKVA EGQTLTASVY LRGTAGLGFR FFLQWINAAG SSISAPNSLM LTVTPGGERV QYSGVAPAGA VSCYVYLRIY SATGAVTSGH VEMARPQFEY GTRATGWRDN GQVNAATTSA VSTAVDSLGS TVTQQGNSIT SVSNRTTSLE NSVNSTTNGL ATKASASAVD ALTNRVSAAE GVNTSQSSSI TELNNNVGAI QDALGASGLD PAPNCLWQFD STTEGWVASG ATLAQGAGFV KITSTGSDPQ LHSGTAATLS ITGSLYSRVR ARITRRAGAV TDWDGQLFYQ TAGHGFSGSY RAIAANPNLA VGESAVVEWD MANLAAGGTD WVDSTITRLR LDMGATSGGA FDVDWVAVGR VAPSASSRAV ESLTSTVTQQ GDDLSAQAQQ LTGLQTSVGN NSASIQQVAN AQSTLNGKIN ASYSVKLQVT AGGQYVATGF GLGVENSGGV LQSTFAVMAD RFAVLNPAGN GFISPFAIQN GQVFINDALI SKLSVQNAIV GTTIASSTYS QFGEPLMTLN FNSGEIIMRN WSRQLTYTKI NNDGIDVVVD GVRRVRMGVW
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