| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1135 |
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| Symbol | |
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| ID | 6110054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1254168 |
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| End bp | 1255184 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641620900 |
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| Product | RNA procession exonuclease-like protein |
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| Protein accession | YP_001748009 |
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| Protein GI | 170720321 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.775803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG TCATCGCCCG CCCCGAAGGC CTGTACTGCC CGCCCGGTGA TTTTTACATC
GACCCTTGGC GACCCGTTGA GCGCGCCATC ATCACCCACG GCCATGGCGA TCATGCCCGT
CGTGGCAACA CTCATTACCT GACCGCCGCC CCGGGGGCCG GCATCCTGCG CAGCCGCCTG
GGCCAGGATA TCGACCTACT GGCCCTGCCC TACGGCGAGC GTATCCGCCA CCACGGCGTC
ACCCTGAGCC TGCACCCGGC CGGGCACGTA CTGGGCTCGG CACAGGTGCG CCTGGAACAT
GAGGGCGAAG TCTGGGTTGC CTCCGGGGAC TACAAAGTCG AGCCGGATGG CACCTGTACT
CCGTTCGAGC CAGTGCGCTG TCACACATTC ATCACCGAGT CGACCTTCGG CCTGCCCATC
TACCGCTGGC CCAGCCAGGC ACAGGTATTT GCGGGGGTGA ATGAATGGTG GCGGGCCAAT
CGCGACCAAG GCAAGGCCAG CGTGCTGTTC TGCTATGCCT TCGGCAAGGC CCAACGAATA
CTTCATGGCC TGGATCCGAG CATCGGGCCG ATCCTGGTAC ATGGCGCAGT AGAGCCGCTG
AACCAGGTAT ACCGAGAGGG CGGAGTACAC CTGCCACAAA CCCTTTATGC CGGTGATATT
CCCCGTAATG ACCCGCTCAT TCGCCAGGCC ATCGTGTTGG CGCCCCCCTC TGCCGCCGGC
AGCAGCTGGA TGCGTCGCTT CGGCGATTAC AGCGATGCCT TCGCCAGTGG CTGGATGCTG
CTGCGCGGCA CGCGACGCCG GCGCGGCGTA GACCGCGGCT TCGTCCTCTC CGACCATGCA
GACTGGCCTG GGCTGCTATG GGCCATTGAC CAGACCGGTG CCGAGCGGGT CATGGTCACC
CACGGTTCGG TCAACGTGCT GGTACGCTAC CTCAGCGAGC GTGGCCTCGA TGCCCGTGCG
TTCGTTACCG AGTACGGTGA CGAAGACGAC ACACCAGCAA CGGAGGCTGA GGCATGA
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| Protein sequence | MDLVIARPEG LYCPPGDFYI DPWRPVERAI ITHGHGDHAR RGNTHYLTAA PGAGILRSRL
GQDIDLLALP YGERIRHHGV TLSLHPAGHV LGSAQVRLEH EGEVWVASGD YKVEPDGTCT
PFEPVRCHTF ITESTFGLPI YRWPSQAQVF AGVNEWWRAN RDQGKASVLF CYAFGKAQRI
LHGLDPSIGP ILVHGAVEPL NQVYREGGVH LPQTLYAGDI PRNDPLIRQA IVLAPPSAAG
SSWMRRFGDY SDAFASGWML LRGTRRRRGV DRGFVLSDHA DWPGLLWAID QTGAERVMVT
HGSVNVLVRY LSERGLDARA FVTEYGDEDD TPATEAEA
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