| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1101 |
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| Symbol | |
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| ID | 6110020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1216989 |
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| End bp | 1221119 |
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| Gene Length | 4131 bp |
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| Protein Length | 1376 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641620866 |
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| Product | hypothetical protein |
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| Protein accession | YP_001747975 |
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| Protein GI | 170720287 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCCA TTTCGATTCC TTCCGATTCC GTCGATGCCT TCATCGCTGG CCAGCTGTCA
GGCTGGTTGA GGTCTGCCGA TGTCGACCTG CTTCTGACCC TGCACAGAGC GTTGCGTCAT
CAGCAGGCCG CTGCTGAAGG CGTCAGAAAC ATGTTGGCGC AGACGCCAAG CCTTGAGGCC
TTTGCCACGC CGCTGCTCGA GAGCGCGCTG CGAGAAAGTG GCCTGGCCGA CGCAGACGTG
CGCAACATGC AAGTCTACAT TGAGGACGAT GTGCCTTTGC CTAGTGCCGC GCCACGTCTG
CATACACCGT GGAGGACGCT ACATAGCGTG CAGCCCTTGC TGACGGCGGC ACTGCACAAC
TTTCACGAGG ACGAGACGCT CCCCTCCATT CATCGCCGTG CTCATCTGCA GAATGCTGAC
GGCAGTAAGC TGCCGCTGGC ATTTGAAGCA TTTGCCAGCT GTTGCAGAAC GCTGGATATA
GGAGGGCGCT ATCAGCAAGT GTTGCGCGCG CGGCTGTTTC CGAAAAGCAG ACCCCCCGCG
CCAGAGGGTT TTGCCCGCGC AGGGGTGGAG CGCTTGCTCG AAGAAAATCT GCGCGCGAAG
ATGGAAGTTG CGGTGCGTAT GGCAAGGATC AAGTCCGAGC TGGACGATGC CGACTACCTG
CGTTTGTTGC CTGTGTGCGC AAGCAAACCC ATCGTGCCGG CGGTCTCAGG TATTGCCACG
CCTCGCCAAC TGTACCTGTT GGGCAAACGC ATCCATGGGC CCATTGTCTT CGAAATGCGC
GACAGTGCCG GAGGGCCGCT GTCGGGGATC ATCAGCTGGA TACCGCAAGA TCCCTATCGG
CAGATCGCCA GGTACGCTAC CTGGGCTGCC TTCTATCAGT CGTTGGCCAA ACAGCTGCGT
GCGCCTCATT ACCGTTCTTT TTTCCGTCGA TTCATCAGTG AGCGTGATAA ACCGACCTTT
ACGGCAACCC TCGAGCGCCT GATCCGGGCG AGCACTGCGA AGGTGCCGGT TGATCTGGAT
GGGCGCAATT TCTCGATCGA TACGTCCTTG TTCGCCTATC TGCGGGGCCA GCAGGTCGAC
AAGATGCTCG ATGACGCAAG AGTCCTGGCA GTGCCCACCG CTGACGAGAC TGCGATCGAG
CGGCATCAGC GGCTGGAAGT GCTCAAGAGC GCTGGCTTCG ATCTGCTCAA CCTGGCTGCG
CTTTTCGTTC CGGTACTGGG CGAGGTGATG TTCGCAGTGG CAGCGGTGGA CGTTGTCAGT
GAAGTGTATA AAGGCTATGC CGATTGGCGC ATTGGCGACC GCCAGGGGGC ATTGGATCAC
CTGTTCGGTG TGGCAGAGAA CCTGGCGGTC GGTACGGTGG TCGGCGCCGC ACAGATAGGC
GTGGGCCGGG TGCTGGAGCG CGTCCCCTTT GTCGATGCGC TCACCCCCTT GTACGAGGGC
GAGGGCCGAT ACCGGCTGGC GGACTGGCCC GCTTCGGCTC ACCACATCGA CGGTGGAGGG
GCACTTTTGC GACGCTTTGG TGGGCGCTGG GCGCAAACAT CAGACCAAGC TGCCGAAACT
GTACTGCGCG TCACCGGGCT TGAGCAGGAT CACTTGCGCA ACCTGCATCT GCAGGGGGAT
GCTCCCCCCG CTCGCCTGCT CGATGCCCAT GAGCGCCACG AACTCCATGC TCTGGAGCCG
CACCTGCAGG GGGCCGCCTT GGAGCGTGAG CTGGCAGCTC GGCAAGACCA GCCCTCTGCT
GCTGGCGCGT TGCTGATCAG GGCATTCCCC GGCCTTTCCG TTCGCGGCGC TGAAAGCGTC
CTGGAACAGG CCAGTGGTGA GCAGATCAAG GCGCTGCTGA CCAGCAGCCG TATACCTTTG
GAAATGGCTG AGCGAGCTCG TTGGATCTTG CGCGAGAGTC GCCTGGATCG TGCGTTGTTG
GGGTTCGAGC ACGAAGGCGC GATCAATGAT GCTACTCAGC GGCTGGTTCT GAAGTGGGTC
AACGAGCTCG CGCCCTGGCC GGCTTCAGTT CGCATTGAAC TGCGGCTGGG CGAAGCGAAG
GGGCGGTTGG TTGCATCGGT AGGGAGCAAC ACTGCGACAC GGATCCGGTG CCTTGTTCAG
ACCGAGCAGG GCTACCAGTT GAGTGATGCT ACGCAACCAA CAATTGGACA AGGATTATTG
TCCTGCCTGA TCCAGACACT TGAGGAGGGC CAGAAAGTGG CGCTCGGGGA TGGCCTGATA
GATGCCCGCA CTCTAGGCAA CAGGGTTGCT CAAGTGGCTA GCGCTGACCG GCAAAAGACA
GCGCAGTTGC TGGGATTGCG GCCGATCGGA GAACGCTTTC GCCCGCCGCA GCGCCTCGCC
GACGGCCGTG TCGGCTATGC ACTCAGTGGA GGTGGAGAAA GTAGCCGTCA GGCTATTCGC
CGCGGGATAC ATGAAATTTT CCCAACCCTG ACGGACGCGC AACTTGACGC TTACCTGGGC
GACCTGATGG AGCGCCGCAT CGGACTCTGG GACCACCTCA GCAGGCTGCG GCAGCAGCTG
GATAGCTTGC GCGAAGCGCT GGATGCCTGG CAGCGTGAGC GCGTGAGCTT CATGGATGGG
CGCAGGCGAC AGCGCGTGGC CAGCCAGATC CGTCGCGCCT GGCGCCGCAA GACGGCAGGC
CTGGCAGGTG ACGATTTCAG CCTGCATATC GAGGGTGAGT TGGTAGGCAG CCTGCCGAAT
TTACCAGCAG GCCTCGAGTT CGCCCATGTG CAGCGGTTGA CGTTGCGCAA CATGAGCCTT
GACCGAGTTG ATGAAGATTT CCTGCTCAGG TTCACCGGCC TTCGTGAACT CGACCTACGC
GACAATCAGT TGATCACCAT ACCGGAGGGC CTGGAGCGCC TGACCGGTCT GCGCAGGCTG
CATCTTGCAG GAAATCGGAT AGCCTTCGAT GCTCAGGGCA ACCTCCGGCT GGCAAGCCTT
TCCATGCTGC AGCAGCTTGA TCTGACCTAT AACCCGCTGG GCCTGGTCCC CGACCTTTCC
GGGTTACGCC ACTTGCGCGA AGTATCGTTA CGCGCCACTG GGCTACAAGC CTTGCCTGAA
GCTGCCGTGA TGCCGTGGAG GGGCCTTGTG GATATTCGTG AAAACCAGAT CCGCCAGGTC
ACCGGTGATT TGCGCAGCCT GAATGGTCGA TTGCAGCGCC TGTCGTTACA CGACAACCCG
CTGGACGAGG CAAGCGAGTC ACTGCTTTCG CGCAGCAGCA GTGATGACTA CCCAGCGAAT
CGGCGCAGCT CTTACCACCA CGCCATCGCA GATACCAACC TGCAAAATCA ATGGATGGGC
AGCGTTTCCG GTGACTTGCT AGCGCAGCGC AGAGAACTCT GGACGAGGTT GTCCGAGGAA
CCGCAATCGG CAGACCTGTT CAGATTTCTG GCGGATTTTG CCGGTTCTGA CGATTTTCAA
GACCACCCGC GCTACTACCG TGCCAGGGTA TGGCGGGTCC TCGAACTTTG CGCAGACAAC
ACCGACGTGC GTGAGGCAGT TTTCTGGCAA GTGCGAGGCC CCAGAACCTG TGAGGATCAG
CTGCTGCTCA TACTCAGCCA ACTGGAAGTC AGAACGCACA TCGCCTTGCA TAGCGCAGAC
GCCAGCACAG AGCGCGCCGA AGCAACCTTG TTACGGTTGG GGCGCTCACT CTATCGTCTG
GATCAGGTAG ACAGTATCGC CGCCCGGCAT ATTGAGGAAA TGCGCCAGAA TCCTTACGCG
GTGGTGGATG ACATTGAGGT TTACCTTGCC TATCGGGTCA ACCTGGCTGA CAGGCTCGGC
TTGCCGGCCC AGCCACGGCA TATGAATTAC CCCGAGCATA GCGGCGTAAC AGGAACACGC
ATACTGCGCG CCCGCGCGGA GGTCCTTGCC GGTGAGAATA TCGAGGTATT GAGCAATGCG
CTGGCACAGC GGGAGTTTTG GCAAGGGTAT GCACGCAATC GCTATCCAGA GCGTTTTGAA
GCGCTCGCTG CGCCTTTTCA TGAGCAGCTG GAGGGGTATG AGCGCGAGGC GGGCGAGTCT
GGCGAGCAGC TTTACCTTGA ACGTGCCGAC GTATTGATGG CAGCCCTCAA TGCCGAAGAG
CGTGCGCTTT ACCTGGAGCT GGCCAGAGAG GCATACGAGC GGGAAGTCTG A
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| Protein sequence | MSAISIPSDS VDAFIAGQLS GWLRSADVDL LLTLHRALRH QQAAAEGVRN MLAQTPSLEA
FATPLLESAL RESGLADADV RNMQVYIEDD VPLPSAAPRL HTPWRTLHSV QPLLTAALHN
FHEDETLPSI HRRAHLQNAD GSKLPLAFEA FASCCRTLDI GGRYQQVLRA RLFPKSRPPA
PEGFARAGVE RLLEENLRAK MEVAVRMARI KSELDDADYL RLLPVCASKP IVPAVSGIAT
PRQLYLLGKR IHGPIVFEMR DSAGGPLSGI ISWIPQDPYR QIARYATWAA FYQSLAKQLR
APHYRSFFRR FISERDKPTF TATLERLIRA STAKVPVDLD GRNFSIDTSL FAYLRGQQVD
KMLDDARVLA VPTADETAIE RHQRLEVLKS AGFDLLNLAA LFVPVLGEVM FAVAAVDVVS
EVYKGYADWR IGDRQGALDH LFGVAENLAV GTVVGAAQIG VGRVLERVPF VDALTPLYEG
EGRYRLADWP ASAHHIDGGG ALLRRFGGRW AQTSDQAAET VLRVTGLEQD HLRNLHLQGD
APPARLLDAH ERHELHALEP HLQGAALERE LAARQDQPSA AGALLIRAFP GLSVRGAESV
LEQASGEQIK ALLTSSRIPL EMAERARWIL RESRLDRALL GFEHEGAIND ATQRLVLKWV
NELAPWPASV RIELRLGEAK GRLVASVGSN TATRIRCLVQ TEQGYQLSDA TQPTIGQGLL
SCLIQTLEEG QKVALGDGLI DARTLGNRVA QVASADRQKT AQLLGLRPIG ERFRPPQRLA
DGRVGYALSG GGESSRQAIR RGIHEIFPTL TDAQLDAYLG DLMERRIGLW DHLSRLRQQL
DSLREALDAW QRERVSFMDG RRRQRVASQI RRAWRRKTAG LAGDDFSLHI EGELVGSLPN
LPAGLEFAHV QRLTLRNMSL DRVDEDFLLR FTGLRELDLR DNQLITIPEG LERLTGLRRL
HLAGNRIAFD AQGNLRLASL SMLQQLDLTY NPLGLVPDLS GLRHLREVSL RATGLQALPE
AAVMPWRGLV DIRENQIRQV TGDLRSLNGR LQRLSLHDNP LDEASESLLS RSSSDDYPAN
RRSSYHHAIA DTNLQNQWMG SVSGDLLAQR RELWTRLSEE PQSADLFRFL ADFAGSDDFQ
DHPRYYRARV WRVLELCADN TDVREAVFWQ VRGPRTCEDQ LLLILSQLEV RTHIALHSAD
ASTERAEATL LRLGRSLYRL DQVDSIAARH IEEMRQNPYA VVDDIEVYLA YRVNLADRLG
LPAQPRHMNY PEHSGVTGTR ILRARAEVLA GENIEVLSNA LAQREFWQGY ARNRYPERFE
ALAAPFHEQL EGYEREAGES GEQLYLERAD VLMAALNAEE RALYLELARE AYEREV
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