Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1009 |
Symbol | |
ID | 6109927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 1107397 |
End bp | 1108161 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641620773 |
Product | putative deacetylase |
Protein accession | YP_001747883 |
Protein GI | 170720195 |
COG category | [R] General function prediction only |
COG ID | [COG3233] Predicted deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00774779 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000000895825 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTGAGC CCAGCGCCGC GCCGGGCAGC CTGATGCTTG TGCTGCACGA CATCTCGCCC GAGACCTGGC CGGACTACCA GCCCTTCGTT CAGGCGGTCG ATGAAATGGG CCATGTACCC ATGACCTGGC TGGTAGTGCC GAACTTCCAT CACCGCAACC CGCTGGCAGG CTCCCCCGCA TTCTGCCGCT TGCTCGAACG ACGCCTGGCG CGTGGCGATG AACTTGCGCT GCATGGCTTG TATCACACCG ACGATGGGCC ATCGCCGAGC AGCCTGCGTG AGTACTTCAT GCGCCGCCTG TACACCCATG AAGGCGAGTT CTATGCCTTG AACCAAGCGC AGGCCATGCA ACGCCTGGAG GCCGGCCTTG AAGTCTTCGC CCGGCAAGGC TGGCCCGTCG CCGGTTTCGT CGCCCCGGCC TGGCTGATGA GCCAAGGGAC CCGCCAGGCC CTGAGCCAAC TGCCGTTGCG CTACACCAGC ACCCCGCAGC ACCTCTATCG TTTGCCCGAC TTCGCCGCGT TCAATGCCCC TGGCTTGGTC TGGAGTGCCC GTAGCGCCTG GCGCCGCCGT GTGTCGCAGA CGGTCTGTGA CTGGCAGTGC AGGCGCTGGC GCAACGCTGA AACCCTTCGC CTTGGGCTGC ATCCGGTGGA TATGCGCCAC CGCTCGTCAC GAGATTACTG GCTGCGAACG CTGGACAAGC TGCTGATGCA AGGGCGCGAA CCCCTGACCA AGTCGGCCTG GCTACAGCGC CAGGCAAACG GATGA
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Protein sequence | MLEPSAAPGS LMLVLHDISP ETWPDYQPFV QAVDEMGHVP MTWLVVPNFH HRNPLAGSPA FCRLLERRLA RGDELALHGL YHTDDGPSPS SLREYFMRRL YTHEGEFYAL NQAQAMQRLE AGLEVFARQG WPVAGFVAPA WLMSQGTRQA LSQLPLRYTS TPQHLYRLPD FAAFNAPGLV WSARSAWRRR VSQTVCDWQC RRWRNAETLR LGLHPVDMRH RSSRDYWLRT LDKLLMQGRE PLTKSAWLQR QANG
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