| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0843 |
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| Symbol | |
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| ID | 6109760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 933179 |
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| End bp | 933880 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641620607 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001747717 |
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| Protein GI | 170720029 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGA CCCTGTTGTT CACCGGCCTG CTCTTGCTGA CAGGATGCGC CGGCCAGCAG
CCTGAAGGGT TCGGACACTT GTTCGGCACC TCGAGCTGCG GCAAGCCGGA CGCCGACCAG
CAACTGGCGC TGAACCTGGC GGACGAGATG CTCAACGATG GCCGCCCGCA TGCGAGCCTG
GCGCACCTGG AGCAGTTGCC CAACACCCTC GACCAGGTAC GCCTGCGCAA GGCCAGGGTC
TCGCGCCTGT TGGGGCGCAG CGAAGCAGAA CCTTTGTACC GCAGCTTGCT CGGCGGCTGC
CTCGCGGCCG AGGGTGAGCA TGGCCTGGGC CAGCTCGCCT CGGCCCGGGG CGATGACGTA
CAGGCCTTGC AGAACCTGCA GCGAGCGGTA CGTCTGGCCC CGACCGACGA GCGGGTTCGC
AATGATCTGG GTGTGGTGCT GATGAGCATG GGCCGGTATG AACAGGCACG GTTCGAATTC
CTGACCGCCA TAGAGCTCAA GGATGACAAC CCGCTGCCCG CCGTCAACCT GGTGACCTTA
GCGCTGCTGC AGGACAACTG GCAGCAAGCC ACTGACCTGG TCGGCCGCCT GCGGCTCAAA
CCGGCGCAGT TTGCCCAGGC CCAGGCACGC GCCAGCCAGA TCAAAGCCAC CGGGCGCGGG
CCGATAGCCT CGGCCGGTGG CGCAGGTGTG ATGGTCAACT GA
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| Protein sequence | MKATLLFTGL LLLTGCAGQQ PEGFGHLFGT SSCGKPDADQ QLALNLADEM LNDGRPHASL
AHLEQLPNTL DQVRLRKARV SRLLGRSEAE PLYRSLLGGC LAAEGEHGLG QLASARGDDV
QALQNLQRAV RLAPTDERVR NDLGVVLMSM GRYEQARFEF LTAIELKDDN PLPAVNLVTL
ALLQDNWQQA TDLVGRLRLK PAQFAQAQAR ASQIKATGRG PIASAGGAGV MVN
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