| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0808 |
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| Symbol | |
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| ID | 6109725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 901434 |
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| End bp | 902126 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620572 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001747682 |
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| Protein GI | 170719994 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.230501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC CAATTCTCGT TACCGGAGCC AGCCAGCGCG TCGGGCTGGC CTTGGCCCTT
GAGCTGGCAG AGGCCGGCCA TACCGTGGTC AGTGCCAGCC GCAGCGTCCA GCCCCAGCCT
GCGCACCCTA ACATCGTGCA GTTCCAGGCC GACCTTTGCC TGGCGGCCGA CCGCCAGGCG
CTGATCGACC ACCTGCAGCA GCACTACGAT GGGCTGCGCG CAATCATCCA CAACGCTTCT
CTTTGGCTCG ACGATGGCCT GGACAACCTG CAGACCATGT TCCGCCTCCA CGTCGAGGCG
CCCTACCACC TGAACCTGGC GCTGGGTGAT TTGCTGAACA AGGTCGACAA GGCCGATATC
ATCCACATCT GCGACGAAAC CTCCTCGCGG GGCAGCAAGA GCCATATCGG CTATGCCGCC
ACCAAGGCAG CGCTGCAGAA CATGGTGCTG TCGTTTGCCG AAAAATATGC GCCCAAGGTA
CACGTCAACG GTATCCTGCC TGGGCTGCTG ATCCTCAAGG AAGGGGGCGA CGAAGCCTAT
CGCCAGCAGA CCCTGAAAAA GGCCCTGCTG GAATTCGAAC CCGGCGCCGG CCCGCTGATC
GAGACGGTCA AATACCTGCT CGAAAGCCAA TACAGCACCG GCAGCCAGGT GGTCATCAAC
GGTGGCCGCC ACCTGAAGAA TCGCATGACC TGA
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| Protein sequence | MNSPILVTGA SQRVGLALAL ELAEAGHTVV SASRSVQPQP AHPNIVQFQA DLCLAADRQA
LIDHLQQHYD GLRAIIHNAS LWLDDGLDNL QTMFRLHVEA PYHLNLALGD LLNKVDKADI
IHICDETSSR GSKSHIGYAA TKAALQNMVL SFAEKYAPKV HVNGILPGLL ILKEGGDEAY
RQQTLKKALL EFEPGAGPLI ETVKYLLESQ YSTGSQVVIN GGRHLKNRMT
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