Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0806 |
Symbol | |
ID | 6109723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 900794 |
End bp | 901135 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641620570 |
Product | HopJ type III effector protein |
Protein accession | YP_001747680 |
Protein GI | 170719992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.269231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGATC TGAACACCCT GCGCGCCAGC CTGGCCAGCG GCAAACACGC CTTTGCCGAC ACCCTGGCGT TCATCGCTGC CAACTACAGC TACCAGCCAC AGGCTTTCAC CAACGGTGGC GTGGAAAACG CCGCCGGGCA GAACGAAGGC TCGTGCAAGA CGCTGGGCCT GGCCCTGCTG GAAGGCCTGA GCGACCAGGA GGCGCTGCTG GCCTTCGGCG AGCACTACCG TGACGTGGCG GCCACGCCTG AGGGCACTGA CCATGGCAAC ATCCGTGCGC TGATCGCGCA TGGCCTGGCA GGTGTGAAGT TCACCGCGCA GCCGCTTTCG CGCAACGCCT GA
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Protein sequence | MTDLNTLRAS LASGKHAFAD TLAFIAANYS YQPQAFTNGG VENAAGQNEG SCKTLGLALL EGLSDQEALL AFGEHYRDVA ATPEGTDHGN IRALIAHGLA GVKFTAQPLS RNA
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