Gene PputW619_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0806 
Symbol 
ID6109723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp900794 
End bp901135 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content66% 
IMG OID641620570 
ProductHopJ type III effector protein 
Protein accessionYP_001747680 
Protein GI170719992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.269231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATC TGAACACCCT GCGCGCCAGC CTGGCCAGCG GCAAACACGC CTTTGCCGAC 
ACCCTGGCGT TCATCGCTGC CAACTACAGC TACCAGCCAC AGGCTTTCAC CAACGGTGGC
GTGGAAAACG CCGCCGGGCA GAACGAAGGC TCGTGCAAGA CGCTGGGCCT GGCCCTGCTG
GAAGGCCTGA GCGACCAGGA GGCGCTGCTG GCCTTCGGCG AGCACTACCG TGACGTGGCG
GCCACGCCTG AGGGCACTGA CCATGGCAAC ATCCGTGCGC TGATCGCGCA TGGCCTGGCA
GGTGTGAAGT TCACCGCGCA GCCGCTTTCG CGCAACGCCT GA
 
Protein sequence
MTDLNTLRAS LASGKHAFAD TLAFIAANYS YQPQAFTNGG VENAAGQNEG SCKTLGLALL 
EGLSDQEALL AFGEHYRDVA ATPEGTDHGN IRALIAHGLA GVKFTAQPLS RNA